RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA674048" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674048 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4471083 4471083 PRJNA674048_P_NODE_26944_length_169_cov_0.866667_g26741_i0 PRJNA674048 26944 169 0.866667 1.46466723 Leviviridae sp. 2027243 Viruses Viruses 296 5.9e-76   NTclustered gi|2245488662|gb|ON163447.1| 2027243 g26741 i0 98.225 1 169 3 100 0 1 169 198 366 MAG: Leviviridae sp. isolate 147b-k141_250028 RNA dependent RNA polymerase gene, partial cds blastn 169 296 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
7544034 7544034 PRJNA674048_P_NODE_34306_length_150_cov_42846.019802_g34103_i0 PRJNA674048 34306 150 42846.019802 64269.029703 Orthornavirae 2732396 Viruses Viruses 106 9.25e-19   NTclustered gi|2183423903|gb|MZ679790.1| 2027243 g34103 i0 96.825 44.3066666666667 63 2 93 0 88 150 3157 3219 MAG: Leviviridae sp. isolate R28-k141_67620 genomic sequence blastn 6646 106 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
15945702 15945702 PRJNA674048_P_NODE_13153_length_250_cov_71821.771144_g12950_i0 PRJNA674048 13153 250 71821.771144 179554.42786 Leviviridae sp. 2027243 Viruses Viruses 110 1.32e-19   NTclustered gi|2183423903|gb|MZ679790.1| 2027243 g12950 i0 96.97 24.168 66 1 49 1 136 201 3154 3090 MAG: Leviviridae sp. isolate R28-k141_67620 genomic sequence blastn 6042 110 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;