RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA674048" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA674048 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15945758 15945758 PRJNA674048_P_NODE_20033_length_197_cov_1.405405_g19830_i0 PRJNA674048 20033 197 1.405405 2.76864785 Diadema antillarum 105358 Echinodermata other_Eukaryota 219 1.59e-52   NTclustered gi|2919484110|ref|XM_071646425.1| 105358 g19830 i0 88.043 91.7664974619289 184 22 93 0 1 184 276 93 PREDICTED: Diadema antillarum calmodulin-like (LOC139735677), mRNA blastn 18078 219 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
19769999 19769999 PRJNA674048_P_NODE_27696_length_168_cov_0.873950_g27493_i0 PRJNA674048 27696 168 0.87395 1.468236 Asterias rubens 7604 Echinodermata other_Eukaryota 54.7 0.004   NTclustered gi|1834292992|ref|XM_033790200.1| 7604 g27493 i0 94.286 0.208333333333333 35 2 21 0 74 108 314 348 PREDICTED: Asterias rubens arylsulfatase B-like (LOC117305339), mRNA blastn 35 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;