RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA674048" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA674048 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
642983 642983 PRJNA674048_P_NODE_18261_length_207_cov_1.968354_g18058_i0 PRJNA674048 18261 207 1.968354 4.07449278 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 52.8 0.018   NTclustered gi|2782839894|ref|XM_067055043.1| 252671 g18058 i0 100 0.270531400966184 28 0 14 0 94 121 7961 7988 PREDICTED: Clytia hemisphaerica uncharacterized protein (LOC136798434), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
12122405 12122405 PRJNA674048_P_NODE_24070_length_179_cov_1.600000_g23867_i0 PRJNA674048 24070 179 1.6 2.864 Orbicella faveolata 48498 Cnidaria other_Eukaryota 73.1 1.16e-8   NTclustered gi|1176092094|ref|XM_020760863.1| 48498 g23867 i0 93.75 1.35195530726257 48 3 27 0 1 48 2171 2218 PREDICTED: Orbicella faveolata tetraspanin-33-like (LOC110054531), mRNA blastn 242 73.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
12645509 12645509 PRJNA674048_P_NODE_5670_length_432_cov_128.678851_g5467_i0 PRJNA674048 5670 432 128.678851 555.89263632 Ellisella 328399 Cnidaria other_Eukaryota 97.1 1.9e-15   NTclustered gi|2689317297|gb|PP410744.1| 2751895 g5467 i0 95.161 14.3657407407407 62 2 23 1 326 387 3528 3588 Ellisella elongata voucher USNM:1660444 large subunit ribosomal RNA gene, partial sequence blastn 6206 97.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Ellisellidae Ellisella Ellisella elongata
15945821 15945821 PRJNA674048_P_NODE_28573_length_167_cov_0.881356_g28370_i0 PRJNA674048 28573 167 0.881356 1.47186452 Acropora digitifera 70779 Cnidaria other_Eukaryota 207 2.83e-49   NTclustered gi|1005447337|ref|XM_015905470.1| 70779 g28370 i0 89.157 6.96407185628743 166 18 99 0 2 167 824 659 PREDICTED: Acropora digitifera uncharacterized LOC107340119 (LOC107340119), mRNA blastn 1163 207 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera
22320384 22320384 PRJNA674048_P_NODE_18658_length_205_cov_1.333333_g18455_i0 PRJNA674048 18658 205 1.333333 2.73333265 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.005   NTclustered gi|2917940737|emb|OZ237566.1| 6108 g18455 i0 100 0.141463414634146 29 0 14 0 127 155 12619551 12619523 Anemonia sulcata genome assembly, chromosome: 12 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
23595995 23595995 PRJNA674048_P_NODE_29539_length_166_cov_0.888889_g29336_i0 PRJNA674048 29539 166 0.888889 1.47555574 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 110 8.13e-20   NTclustered gi|1778050111|ref|XM_031706627.1| 6105 g29336 i0 81.481 3.25301204819277 135 23 81 2 1 134 204 71 PREDICTED: Actinia tenebrosa splicing factor U2AF 26 kDa subunit-like (LOC116298240), transcript variant X4, mRNA blastn 540 110 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;