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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA674048" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 17 ✖

bioproject 1

  • PRJNA674048 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
643014 643014 PRJNA674048_P_NODE_22881_length_184_cov_1.155556_g22678_i0 PRJNA674048 22881 184 1.155556 2.12622304 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 126 9.12e-25   NTclustered gi|290975281|ref|XM_002670326.1| 5762 g22678 i0 83.582 6.43478260869565 134 22 73 0 49 182 224 91 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82817), mRNA blastn 1184 126 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3193941 3193941 PRJNA674048_P_NODE_17003_length_215_cov_5.843373_g16800_i0 PRJNA674048 17003 215 5.843373 12.56325195 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 248 2.25e-61   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g16800 i0 88.038 116.967441860465 209 25 97 0 7 215 4900 5108 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 25148 248 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
4470991 4470991 PRJNA674048_P_NODE_15424_length_227_cov_4.140449_g15221_i0 PRJNA674048 15424 227 4.140449 9.39881923 Sphenomonas teres 2704098 Euglenozoa other_Eukaryota 337 4.9799999999999995e-88   NTclustered gi|1803019522|gb|MT007908.1| 2704098 g15221 i0 93.421 5.54185022026432 228 13 99 2 2 227 345 118 Sphenomonas teres isolate UJL10 small subunit ribosomal RNA gene, partial sequence blastn 1258 337 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Sphenomonadidae Sphenomonas Sphenomonas teres
4994362 4994362 PRJNA674048_P_NODE_3044_length_648_cov_10.110184_g2871_i0 PRJNA674048 3044 648 10.110184 65.51399232 Naegleria 5761 Heterolobosea other_Eukaryota 1120 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g2871 i0 97.84 30.9614197530864 648 14 100 0 1 648 2999 2352 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 20063 1120 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7021753 7021753 PRJNA674048_P_NODE_27966_length_168_cov_0.873950_g27763_i0 PRJNA674048 27966 168 0.87395 1.468236 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 56.5 0.001   NTclustered gi|290986245|ref|XM_002675789.1| 5762 g27763 i0 100 0.345238095238095 30 0 18 0 89 118 873 844 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_68813), partial mRNA blastn 58 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7021795 7021795 PRJNA674048_P_NODE_32066_length_163_cov_0.912281_g31863_i0 PRJNA674048 32066 163 0.912281 1.48701803 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 159 7.779999999999998e-35   NTclustered gi|290995629|ref|XM_002680340.1| 5762 g31863 i0 89.6 0.766871165644172 125 13 77 0 1 125 2692 2816 Naegleria gruberi serine/threonine protein kinase (NAEGRDRAFT_78828), partial mRNA blastn 125 159 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7544149 7544149 PRJNA674048_P_NODE_8906_length_320_cov_8.501845_g8703_i0 PRJNA674048 8906 320 8.501845 27.205904 Naegleria 5761 Heterolobosea other_Eukaryota 592 1.4299999999999996e-164   NTclustered gi|2618963742|gb|OR769034.1| 5762 g8703 i0 100 94.325 320 0 100 0 1 320 74 393 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 30184 592 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8296504 8296504 PRJNA674048_P_NODE_7187_length_369_cov_2.984375_g6984_i0 PRJNA674048 7187 369 2.984375 11.01234375 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 488 2.26e-133   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g6984 i0 90.451 141.482384823848 377 27 100 7 1 369 4772 4397 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 52207 488 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
8818973 8818973 PRJNA674048_P_NODE_16187_length_221_cov_2.261628_g15984_i0 PRJNA674048 16187 221 2.261628 4.99819788 Naegleria 5761 Heterolobosea other_Eukaryota 409 1.0100000000000001e-109   NTclustered gi|2801876964|gb|PQ308414.1| 37103 g15984 i0 100 99.9683257918552 221 0 100 0 1 221 266 46 Naegleria sp. isolate N1 small subunit ribosomal RNA gene, partial sequence blastn 22093 409 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
11369454 11369454 PRJNA674048_P_NODE_17709_length_210_cov_6.347826_g17506_i0 PRJNA674048 17709 210 6.347826 13.3304346 Naegleria 5761 Heterolobosea other_Eukaryota 388 1.24e-103   NTclustered gi|32966202|gb|AY266314.1| 5762 g17506 i0 100 99.9952380952381 210 0 100 0 1 210 264 473 Naegleria gruberi 18S ribosomal RNA gene, partial sequence blastn 20999 388 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12645117 12645117 PRJNA674048_P_NODE_10970_length_281_cov_3.168103_g10767_i0 PRJNA674048 10970 281 3.168103 8.90236943 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 228 4.0099999999999984e-55   NTclustered gi|2119430704|ref|XM_044702190.1| 5763 g10767 i0 85.455 137.110320284698 220 30 78 2 1 219 4 222 Naegleria fowleri uncharacterized protein (FDP41_011747), partial mRNA blastn 38528 228 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
13397245 13397245 PRJNA674048_P_NODE_27591_length_168_cov_1.470588_g27388_i0 PRJNA674048 27591 168 1.470588 2.47058784 Scytomonas saepesedens 1732443 Euglenozoa other_Eukaryota 291 2.75e-74   NTclustered gi|937541989|gb|KP306755.1| 1732443 g27388 i0 97.647 44.0119047619048 170 2 100 1 1 168 1436 1267 Scytomonas saepesedens 18S ribosomal RNA gene, partial sequence blastn 7394 291 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Scytomonas Scytomonas saepesedens
15194470 15194470 PRJNA674048_P_NODE_16292_length_220_cov_11.491228_g16089_i0 PRJNA674048 16292 220 11.491228 25.2807016 Naegleria 5761 Heterolobosea other_Eukaryota 407 3.61e-109   NTclustered gi|2618963742|gb|OR769034.1| 5762 g16089 i0 100 10.1181818181818 220 0 100 0 1 220 5548 5767 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2226 407 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19769985 19769985 PRJNA674048_P_NODE_25996_length_172_cov_1.577236_g25793_i0 PRJNA674048 25996 172 1.577236 2.71284592 Bodo saltans 75058 Euglenozoa other_Eukaryota 172 1.06e-38   NTclustered gi|302026180|gb|GQ377699.1| 75058 g25793 i0 91.27 72.7616279069767 126 11 73 0 1 126 174 49 Bodo saltans elongation factor 1 alpha mRNA, complete cds blastn 12515 172 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
19770070 19770070 PRJNA674048_P_NODE_5496_length_442_cov_6.829517_g5293_i0 PRJNA674048 5496 442 6.829517 30.18646514 Sphenomonas teres 2704098 Euglenozoa other_Eukaryota 516 1.26e-141   NTclustered gi|1803019522|gb|MT007908.1| 2704098 g5293 i0 91.071 8.53846153846154 392 19 85 9 66 441 802 1193 Sphenomonas teres isolate UJL10 small subunit ribosomal RNA gene, partial sequence blastn 3774 516 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Sphenomonadidae Sphenomonas Sphenomonas teres
23595910 23595910 PRJNA674048_P_NODE_18639_length_205_cov_1.346154_g18436_i0 PRJNA674048 18639 205 1.346154 2.7596157 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 351 1.58e-92   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g18436 i0 97.561 12.2487804878049 205 5 100 0 1 205 2283 2079 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2511 351 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
24869247 24869247 PRJNA674048_P_NODE_17860_length_210_cov_1.080745_g17657_i0 PRJNA674048 17860 210 1.080745 2.2695645 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 342 9.769999999999999e-90   NTclustered gi|11466174|ref|NC_002573.1| 5762 g17657 i0 95.814 1.02380952380952 215 4 100 2 1 210 272 486 Naegleria gruberi mitochondrion, complete genome blastn 215 342 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;