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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA674048" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA674048 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1165803 1165803 PRJNA674048_P_NODE_1101_length_1113_cov_2.779135_g1000_i0 PRJNA674048 1101 1113 2.779135 30.93177255 Entamoeba 5758 Evosea other_Eukaryota 774 0   NTclustered gi|511083902|dbj|AK419160.1| 5759 g1000 i0 80.151 95.48158131177 1063 189 95 20 1 1052 1080 29 Entamoeba histolytica cDNA clone: Xeh-003B20, actin, complete cds, strain: HM-1:IMSS blastn 106271 774 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
3193922 3193922 PRJNA674048_P_NODE_13463_length_247_cov_1.000000_g13260_i0 PRJNA674048 13463 247 1 2.47 Entamoeba dispar 46681 Evosea other_Eukaryota 75 4.76e-9   NTclustered gi|167384666|ref|XM_001736995.1| 370354 g13260 i0 92.308 13.0364372469636 52 4 21 0 7 58 157 106 Entamoeba dispar SAW760 protein disulfide isomerase, putative (EDI_271830), partial mRNA blastn 3220 75 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
4471067 4471067 PRJNA674048_P_NODE_25744_length_173_cov_1.258065_g25541_i0 PRJNA674048 25744 173 1.258065 2.17645245 Spumochlamys perforata 675831 Tubulinea other_Eukaryota 320 3.61e-83   NTclustered gi|259595675|gb|FJ705339.1| 675831 g25541 i0 100 75.7861271676301 173 0 100 0 1 173 1538 1366 Spumochlamys perforata clone 2504 18S ribosomal RNA gene, partial sequence blastn 13111 320 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys perforata
4471101 4471101 PRJNA674048_P_NODE_28924_length_166_cov_3.059829_g28721_i0 PRJNA674048 28924 166 3.059829 5.07931614 Amoebozoa sp. SZA19 1089205 Root_unresolved Root_unresolved 274 2.73e-69   NTclustered gi|441475832|emb|FN562422.4| 1089205 g28721 i0 96.933 11.855421686747 163 5 98 0 1 163 23 185 Amoebozoa sp. SZA19 18S rRNA gene, isolate SZA19 blastn 1968 274 1 Eukaryota Amoebozoa             Amoebozoa sp. SZA19
4471147 4471147 PRJNA674048_P_NODE_5704_length_430_cov_18.005249_g5501_i0 PRJNA674048 5704 430 18.005249 77.4225707 Vannella croatica 1778588 Discosea other_Eukaryota 599 1.1799999999999997e-166   NTclustered gi|973761167|gb|KT345693.1| 1778588 g5501 i0 91.841 89.7953488372093 429 35 99 0 1 429 545 973 Vannella croatica isolate KRKA 29.9.7.6.1 small subunit ribosomal RNA gene, partial sequence blastn 38612 599 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella croatica
9571569 9571569 PRJNA674048_P_NODE_17368_length_213_cov_1.719512_g17165_i0 PRJNA674048 17368 213 1.719512 3.66256056 Spumochlamys perforata 675831 Tubulinea other_Eukaryota 381 2.1e-101   NTclustered gi|259595675|gb|FJ705339.1| 675831 g17165 i0 99.061 10.849765258216 213 1 100 1 1 213 411 200 Spumochlamys perforata clone 2504 18S ribosomal RNA gene, partial sequence blastn 2311 381 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys perforata
9571707 9571707 PRJNA674048_P_NODE_33468_length_157_cov_4.185185_g33265_i0 PRJNA674048 33468 157 4.185185 6.57074045 Vannella sp. ACN1 1215628 Discosea other_Eukaryota 279 5.46e-71   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g33265 i0 98.726 35.9872611464968 157 2 100 0 1 157 140 296 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 5650 279 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
10847100 10847100 PRJNA674048_P_NODE_11189_length_278_cov_2.026201_g10986_i0 PRJNA674048 11189 278 2.026201 5.63283878 Vannella miroides 218656 Discosea other_Eukaryota 442 1.2999999999999995e-119   NTclustered gi|27803574|gb|AY183888.1| 218656 g10986 i0 95.324 93.7661870503597 278 13 100 0 1 278 1929 1652 Vannella miroides small subunit ribosomal RNA gene, complete sequence blastn 26067 442 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella miroides
12122380 12122380 PRJNA674048_P_NODE_20550_length_194_cov_1.793103_g20347_i0 PRJNA674048 20550 194 1.793103 3.47861982 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 235 1.55e-57   NTclustered gi|470398688|ref|XM_004335296.1| 1257118 g20347 i0 89.305 199.824742268041 187 20 96 0 8 194 1 187 Acanthamoeba castellanii str. Neff polyubiquitin, putative (ACA1_239270), partial mRNA blastn 38766 235 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13397122 13397122 PRJNA674048_P_NODE_10371_length_291_cov_3.388430_g10168_i0 PRJNA674048 10371 291 3.38843 9.8603313 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 80.5 1.24e-10   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g10168 i0 81.553 0.353951890034364 103 13 34 6 160 259 3623 3722 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 103 80.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
19769939 19769939 PRJNA674048_P_NODE_19796_length_198_cov_2.167785_g19593_i0 PRJNA674048 19796 198 2.167785 4.2922143 Tubulinea group 04 sp. PPD16 1215999 Tubulinea other_Eukaryota 276 9.36e-70   NTclustered gi|399764279|gb|JQ271790.1| 1215999 g19593 i0 91.96 50.7575757575758 199 12 100 4 1 198 848 653 Tubulinea group 04 sp. PPD16 18S ribosomal RNA gene, partial sequence blastn 10050 276 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. PPD16
21045583 21045583 PRJNA674048_P_NODE_13137_length_251_cov_1.415842_g12934_i0 PRJNA674048 13137 251 1.415842 3.55376342 Dictyostelium purpureum 5786 Evosea other_Eukaryota 122 1.7099999999999998e-23   NTclustered gi|330840296|ref|XM_003292106.1| 5786 g12934 i0 83.721 0.51394422310757 129 21 51 0 123 251 2018 1890 Dictyostelium purpureum major vault protein-alpha (DICPUDRAFT_50257), partial mRNA blastn 129 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;