RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA672101" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA672101 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
642080 642080 PRJNA672101_S_NODE_6441_length_385_cov_6.541667_g6410_i0 PRJNA672101 6441 385 6.541667 25.18541795 Hymenobacter sp. YIM 151500-1 2987689 Bacteria Bacteria 695 0   NTclustered gi|2324833882|gb|CP110139.1| 2987689 g6410 i0 99.221 276.433766233766 385 3 100 0 1 385 307089 306705 Hymenobacter sp. YIM 151500-1 chromosome, complete genome blastn 106427 695 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter sp. YIM 151500-1
3193011 3193011 PRJNA672101_S_NODE_6223_length_388_cov_13.412698_g6192_i0 PRJNA672101 6223 388 13.412698 52.04126824 Flavobacterium dauae 1563479 Bacteria Bacteria 56.5 0.003   NTclustered gi|2557430891|gb|CP130821.1| 1563479 g6192 i0 100 0.077319587628866 30 0 8 0 102 131 1161438 1161409 Flavobacterium dauae strain TCH3-2 chromosome, complete genome blastn 30 56.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium dauae
3717227 3717227 PRJNA672101_S_NODE_17863_length_295_cov_6.144144_g17832_i0 PRJNA672101 17863 295 6.144144 18.1252248 Flavobacterium 237 Bacteria Bacteria 545 1.03e-150   NTclustered gi|2447257787|gb|CP092822.1| 1454066 g17832 i0 100 477 295 0 100 0 1 295 1450675 1450381 Flavobacterium sp. WW92 chromosome, complete genome blastn 140715 545 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. WW92
4469921 4469921 PRJNA672101_S_NODE_3004_length_457_cov_6.411458_g2973_i0 PRJNA672101 3004 457 6.411458 29.30036306 Hymenobacter sp. 5516J-16 2932253 Bacteria Bacteria 745 0   NTclustered gi|2221889893|gb|CP095058.1| 2932253 g2973 i0 96.061 298.667396061269 457 18 100 0 1 457 1006872 1006416 Hymenobacter sp. 5516J-16 chromosome, complete genome blastn 136491 745 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter sp. 5516J-16
7020431 7020431 PRJNA672101_S_NODE_1746_length_520_cov_7.118568_g1716_i0 PRJNA672101 1746 520 7.118568 37.0165536 Hymenobacter sp. YIM 151500-1 2987689 Bacteria Bacteria 955 0   NTclustered gi|2324833882|gb|CP110139.1| 2987689 g1716 i0 99.808 318.275 520 1 100 0 1 520 306662 306143 Hymenobacter sp. YIM 151500-1 chromosome, complete genome blastn 165503 955 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter sp. YIM 151500-1
12644805 12644805 PRJNA672101_S_NODE_12430_length_329_cov_2.363281_g12399_i0 PRJNA672101 12430 329 2.363281 7.77519449 Flavobacteriaceae 49546 Bacteria Bacteria 553 6.959999999999998e-153   NTclustered gi|2232519123|gb|CP096205.1| 1871076 g12399 i0 96.97 729.373860182371 330 9 100 1 1 329 668074 667745 Flavobacterium azooxidireducens strain IGB 4-14 chromosome, complete genome blastn 239964 558 0.991039426523297 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium azooxidireducens
13395830 13395830 PRJNA672101_S_NODE_13691_length_320_cov_4.542510_g13660_i0 PRJNA672101 13691 320 4.54251 14.536032 Hymenobacter baengnokdamensis 2615203 Bacteria Bacteria 536 6.799999999999998e-148   NTclustered gi|1752950296|gb|CP044285.1| 2615203 g13660 i0 96.875 430.11875 320 10 100 0 1 320 1423319 1423000 Hymenobacter baengnokdamensis strain BRD72 chromosome, complete genome blastn 137638 536 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter baengnokdamensis
13919483 13919483 PRJNA672101_S_NODE_30111_length_247_cov_5.781609_g30080_i0 PRJNA672101 30111 247 5.7816090000000004 14.28057423 Chryseobacterium 59732 Bacteria Bacteria 418 1.9099999999999998e-112   NTclustered gi|2653363380|gb|CP142423.1| 59733 g30080 i0 97.166 6.05668016194332 247 7 100 0 1 247 1201908 1202154 Chryseobacterium scophthalmum strain JUb44 chromosome blastn 1496 418 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium scophthalmum
13919485 13919485 PRJNA672101_S_NODE_34491_length_229_cov_3.096154_g34460_i0 PRJNA672101 34491 229 3.096154 7.09019266 Capnocytophaga 1016 Bacteria Bacteria 424 3.76e-114   NTclustered gi|1139278476|emb|LT692838.1| 1018 g34460 i0 100 99.9868995633188 229 0 100 0 1 229 383 611 Capnocytophaga ochracea partial 16S rRNA gene, isolate W198N_18255 blastn 22897 424 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Capnocytophaga ochracea
14671180 14671180 PRJNA672101_S_NODE_8852_length_358_cov_7.470175_g8821_i0 PRJNA672101 8852 358 7.470175 26.7432265 Chryseobacterium sp. KACC 21268 3025664 Bacteria Bacteria 564 3.519999999999999e-156   NTclustered gi|2446111318|gb|CP117875.1| 3025664 g8821 i0 98.442 457.209497206704 321 3 90 1 38 358 981051 980733 Chryseobacterium sp. KACC 21268 chromosome, complete genome blastn 163681 564 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp. KACC 21268
21567613 21567613 PRJNA672101_S_NODE_9437_length_353_cov_3.025000_g9406_i0 PRJNA672101 9437 353 3.025 10.67825 Dyadobacter 120831 Bacteria Bacteria 606 5.68e-169   NTclustered gi|2221365986|gb|CP094997.1| 2906456 g9406 i0 97.734 421.900849858357 353 6 100 2 1 353 5504394 5504044 Dyadobacter chenwenxiniae strain LJ419 chromosome, complete genome blastn 148931 612 0.990196078431373 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Dyadobacter Dyadobacter chenwenxiniae
23594894 23594894 PRJNA672101_S_NODE_31659_length_244_cov_3.152047_g31628_i0 PRJNA672101 31659 244 3.152047 7.69099468 Hymenobacter yonginensis 748197 Bacteria Bacteria 348 2.51e-91   NTclustered gi|2423912131|gb|CP115396.1| 748197 g31628 i0 95.434 315.995901639344 219 9 89 1 11 228 2576210 2576428 Hymenobacter yonginensis strain KCTC 22745 chromosome, complete genome blastn 77103 348 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter yonginensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;