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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA672101" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 22 ✖

bioproject 1

  • PRJNA672101 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3192688 3192688 PRJNA672101_S_NODE_16343_length_304_cov_1.246753_g16312_i0 PRJNA672101 16343 304 1.246753 3.79012912 Picea abies 3329 Plants Plants 54.7 0.008   NTclustered gi|2835530376|dbj|LC777199.1| 3329 g16312 i0 100 0.1875 29 0 10 0 276 304 405 377 Picea abies Pa-Kumamoto-2022 PaDdl mRNA for D-alanine-D-alanine ligase, complete cds blastn 57 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
3193025 3193025 PRJNA672101_S_NODE_7343_length_374_cov_3.930233_g7312_i0 PRJNA672101 7343 374 3.930233 14.69907142 Oryza sativa 4530 Plants Plants 656 0   NTclustered gi|37989591|dbj|AK119968.1| 39947 g7312 i0 99.176 7.3048128342246 364 3 97 0 1 364 347 710 Oryza sativa Japonica Group cDNA clone:002-184-D12, full insert sequence blastn 2732 656 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
4470077 4470077 PRJNA672101_S_NODE_9764_length_350_cov_3.465704_g9733_i0 PRJNA672101 9764 350 3.465704 12.129964 Hordeum vulgare 4513 Plants Plants 643 4.2899999999999986e-180   NTclustered gi|151420338|dbj|AK251690.1| 112509 g9733 i0 100 2.27428571428571 348 0 99 0 3 350 1544 1197 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf127c16, mRNA sequence blastn 796 643 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
5745328 5745328 PRJNA672101_S_NODE_18925_length_290_cov_9.253456_g18894_i0 PRJNA672101 18925 290 9.253456 26.8350224 Cannabis sativa 3483 Plants Plants 52.8 0.027   NTclustered gi|2748541476|gb|CP158647.1| 3483 g18894 i0 100 0.096551724137931 28 0 10 0 175 202 69990875 69990848 Cannabis sativa cultivar ERBxHO40_23 chromosome 4 blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
7020621 7020621 PRJNA672101_S_NODE_30606_length_246_cov_7.884393_g30575_i0 PRJNA672101 30606 246 7.884393 19.39560678 Picea abies 3329 Plants Plants 56.5 0.002   NTclustered gi|2835530398|dbj|LC777204.1| 3329 g30575 i0 96.97 0.247967479674797 33 1 13 0 214 246 61 29 Picea abies Pa-Kumamoto-2022 PaPbp mRNA for penicillin-binding protein, complete cds blastn 61 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
7020622 7020622 PRJNA672101_S_NODE_30626_length_246_cov_4.167630_g30595_i0 PRJNA672101 30626 246 4.16763 10.2523698 Conocephalum japonicum 134427 Plants Plants 84.2 7.88e-12   NTclustered gi|60543033|dbj|AB185035.1| 134427 g30595 i0 100 4.86991869918699 45 0 18 0 1 45 428 472 Conocephalum japonicum H3 gene for histone 3, complete cds, clone: CS15 blastn 1198 84.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Conocephalaceae Conocephalum Conocephalum japonicum
10094166 10094166 PRJNA672101_S_NODE_27508_length_254_cov_4.392265_g27477_i0 PRJNA672101 27508 254 4.392265 11.1563531 Brassicaceae 3700 Plants Plants 52.8 0.023   NTclustered gi|2258322714|ref|XM_013851268.3| 3708 g27477 i0 100 0.551181102362205 28 0 11 0 17 44 3694 3721 PREDICTED: Brassica napus autophagy-related protein 11-like (LOC106410705), mRNA blastn 140 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
10845792 10845792 PRJNA672101_S_NODE_11089_length_339_cov_2.605263_g11058_i0 PRJNA672101 11089 339 2.605263 8.83184157 Quercus lobata 97700 Plants Plants 577 4.2699999999999996e-160   NTclustered gi|1757522763|ref|XM_031085268.1| 97700 g11058 i0 97.345 35.1592920353982 339 9 100 0 1 339 93 431 PREDICTED: Quercus lobata stress-induced protein KIN2-like (LOC115965948), mRNA blastn 11919 577 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus lobata
12644817 12644817 PRJNA672101_S_NODE_20190_length_284_cov_4.601896_g20159_i0 PRJNA672101 20190 284 4.601896 13.069384640000001 Bryum 37412 Plants Plants 520 5.98e-143   NTclustered gi|109139846|gb|DQ641451.1| 37413 g20159 i0 99.648 98.669014084507 284 1 100 0 1 284 296 13 Bryum argenteum large subunit ribosomal RNA gene, partial sequence blastn 28022 520 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Bryales Bryaceae Bryum Bryum argenteum
13395873 13395873 PRJNA672101_S_NODE_16231_length_304_cov_4.541126_g16200_i0 PRJNA672101 16231 304 4.541126 13.80502304 Calluna vulgaris 13385 Plants Plants 56.5 0.002   NTclustered gi|2917566876|emb|OZ228610.1| 13385 g16200 i0 97.059 0.664473684210526 34 0 11 1 138 170 49713368 49713335 Calluna vulgaris genome assembly, chromosome: 7 blastn 202 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Calluna Calluna vulgaris
13919478 13919478 PRJNA672101_S_NODE_26291_length_259_cov_1.655914_g26260_i0 PRJNA672101 26291 259 1.655914 4.28881726 Actinidia 3624 Plants Plants 462 9.2e-126   NTclustered gi|2090193738|gb|OK036795.1| 165200 g26260 i0 100 97.1312741312741 250 0 97 0 10 259 629 380 Actinidia eriantha isolate WY-1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 25157 462 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Actinidiaceae Actinidia Actinidia eriantha
17220082 17220082 PRJNA672101_S_NODE_33094_length_241_cov_6.315476_g33063_i0 PRJNA672101 33094 241 6.315476 15.22029716 Hordeum vulgare 4513 Plants Plants 363 8.819999999999997e-96   NTclustered gi|326496930|dbj|AK367289.1| 112509 g33063 i0 94.468 47.0373443983403 235 13 98 0 1 235 881 1115 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2054B13 blastn 11336 363 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
19017227 19017227 PRJNA672101_S_NODE_26575_length_258_cov_1.605405_g26544_i0 PRJNA672101 26575 258 1.605405 4.1419449 Eukaryota 2759 Plants Plants 477 3.2699999999999985e-130   NTclustered gi|194707657|gb|BT042908.1| 4577 g26544 i0 100 32.5426356589147 258 0 100 0 1 258 1417 1674 Zea mays full-length cDNA clone ZM_BFc0062L18 mRNA, complete cds blastn 8396 477 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
21044598 21044598 PRJNA672101_S_NODE_4557_length_416_cov_5.851312_g4526_i0 PRJNA672101 4557 416 5.851312 24.34145792 Solanum lycopersicum 4081 Plants Plants 52.8 0.04   NTclustered gi|331640153|gb|AC244586.1| 4081 g4526 i0 100 0.0673076923076923 28 0 7 0 112 139 9819 9846 Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-38l10 map 10, complete sequence blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
22319155 22319155 PRJNA672101_S_NODE_18478_length_292_cov_5.557078_g18447_i0 PRJNA672101 18478 292 5.557078 16.22666776 Nelumbo nucifera 4432 Plants Plants 52.8 0.027   NTclustered gi|1102763362|ref|XM_019197723.1| 4432 g18447 i0 100 0.0958904109589041 28 0 10 0 33 60 759 786 PREDICTED: Nelumbo nucifera transcription factor LAX PANICLE-like (LOC109114696), partial mRNA blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Nelumbonaceae Nelumbo Nelumbo nucifera
22319412 22319412 PRJNA672101_S_NODE_5198_length_404_cov_2.432024_g5167_i0 PRJNA672101 5198 404 2.432024 9.82537696 Nicotiana benthamiana 4100 Plants Plants 135 3.7400000000000006e-27   NTclustered gi|576528492|emb|HF675000.1| 4100 g5167 i0 85.385 25.8613861386139 130 19 32 0 257 386 4192 4321 Nicotiana benthamiana gfp gene for green fluorescent protein and pat gene for phosphinothricin acetyltransferase blastn 10448 135 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana benthamiana
22842976 22842976 PRJNA672101_S_NODE_33098_length_241_cov_5.815476_g33067_i0 PRJNA672101 33098 241 5.815476 14.01529716 Oryza 4527 Plants Plants 52.8 0.022   NTclustered gi|9186821|gb|AC016780.6| 4530 g33067 i0 100 0.464730290456432 28 0 12 0 28 55 84770 84797 Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence blastn 112 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
23594581 23594581 PRJNA672101_S_NODE_11199_length_338_cov_3.596226_g11168_i0 PRJNA672101 11199 338 3.596226 12.15524388 Gossypium hirsutum 3635 Plants Plants 54.7 0.009   NTclustered gi|2029703940|ref|XM_041100755.1| 3635 g11168 i0 94.286 0.103550295857988 35 2 10 0 156 190 203 237 PREDICTED: Gossypium hirsutum ABC transporter G family member 22 (LOC107891207), transcript variant X2, mRNA blastn 35 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Gossypium Gossypium hirsutum
23594834 23594834 PRJNA672101_S_NODE_28299_length_251_cov_4.533708_g28268_i0 PRJNA672101 28299 251 4.533708 11.37960708 Triticum dicoccoides 85692 Plants Plants 106 1.72e-18   NTclustered gi|1931559860|ref|XM_037590031.1| 85692 g28268 i0 93.056 37.1872509960159 72 5 29 0 173 244 619 548 PREDICTED: Triticum dicoccoides polyubiquitin-like (LOC119315405), mRNA blastn 9334 106 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum dicoccoides
24117393 24117393 PRJNA672101_S_NODE_12419_length_329_cov_3.277344_g12388_i0 PRJNA672101 12419 329 3.277344 10.78246176 Poaceae 4479 Plants Plants 584 2.469999999999999e-162   NTclustered gi|1214171912|gb|KY636002.1| 4483 g12388 i0 100 190.936170212766 316 0 96 0 14 329 96780 96465 Aegilops bicornis voucher AE 788 chloroplast, partial genome blastn 62818 584 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops bicornis
24117398 24117398 PRJNA672101_S_NODE_18099_length_294_cov_2.787330_g18068_i0 PRJNA672101 18099 294 2.78733 8.1947502 Aralia 13340 Plants Plants 544 3.69e-150   NTclustered gi|2865139569|gb|PQ516462.1| 45209 g18068 i0 100 100.071428571429 294 0 100 0 1 294 2466 2173 Aralia spinifolia isolate XZ30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 29421 544 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Araliaceae Aralia Aralia spinifolia
24117420 24117420 PRJNA672101_S_NODE_32839_length_242_cov_1.094675_g32808_i0 PRJNA672101 32839 242 1.094675 2.6491135 Eukaryota 2759 Plants Plants 52.8 0.022   NTclustered gi|2835530376|dbj|LC777199.1| 3329 g32808 i0 100 0.231404958677686 28 0 12 0 215 242 404 377 Picea abies Pa-Kumamoto-2022 PaDdl mRNA for D-alanine-D-alanine ligase, complete cds blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;