RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA670521" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA670521 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
638201 638201 PRJNA670521_P_NODE_4061_length_871_cov_6.060150_g3443_i0 PRJNA670521 4061 871 6.06015 52.7839065 Linderina pennispora 61395 Fungi Fungi 331 1.01e-85   NTclustered gi|2028314442|ref|XM_040889132.1| 61395 g3443 i0 78.488 25.1285878300804 516 103 59 8 51 562 26 537 Linderina pennispora ribosomal protein S4e (DL89DRAFT_274030), partial mRNA blastn 21887 331 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
1164878 1164878 PRJNA670521_P_NODE_14741_length_478_cov_3.703704_g13999_i0 PRJNA670521 14741 478 3.703704 17.70370512 Fungi 4751 Fungi Fungi 217 1.56e-51   NTclustered gi|2324021736|ref|XM_051538475.1| 61397 g13999 i0 80.919 47.1589958158996 283 46 58 7 104 382 351 73 Kickxella alabastrina histone-fold-containing protein (BX661DRAFT_201168), partial mRNA blastn 22542 217 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
10842318 10842318 PRJNA670521_P_NODE_67189_length_257_cov_1.255435_g66444_i0 PRJNA670521 67189 257 1.255435 3.22646795 Kickxella alabastrina 61397 Fungi Fungi 189 1.71e-43   NTclustered gi|2324018928|ref|XM_051536891.1| 61397 g66444 i0 80.8 4.78210116731517 250 40 96 8 1 246 2673 2428 Kickxella alabastrina Sec63 Brl domain-containing protein (BX661DRAFT_185870), mRNA blastn 1229 189 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
24864495 24864495 PRJNA670521_P_NODE_80900_length_246_cov_0.890173_g80155_i0 PRJNA670521 80900 246 0.890173 2.18982558 Linderina pennispora 61395 Fungi Fungi 154 5.9200000000000005e-33   NTclustered gi|2028324994|ref|XM_040888346.1| 61395 g80155 i0 79.565 50.9065040650407 230 36 91 11 24 246 850 1075 Linderina pennispora aminopeptidase (DL89DRAFT_269570), mRNA blastn 12523 154 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;