RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA670521" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA670521 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14667023 14667023 PRJNA670521_P_NODE_12_length_7224_cov_32.693609_g8_i0 PRJNA670521 12 7224 32.693609 2361.78631416 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2926 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g8 i0 96.298 0.666112956810631 1783 61 67 5 13 1793 7108 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4812 2926 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
15940838 15940838 PRJNA670521_P_NODE_13_length_7224_cov_29.761851_g8_i1 PRJNA670521 13 7224 29.761851 2149.99611624 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2915 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g8 i1 96.186 0.66625138427464 1783 63 67 5 5432 7212 5329 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4813 2915 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
24864244 24864244 PRJNA670521_P_NODE_27640_length_372_cov_1.030100_g26896_i0 PRJNA670521 27640 372 1.0301 3.831972 Zebrafish picornavirus 1 2304617 Viruses Viruses 569 7.899999999999997e-158   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g26896 i0 94.34 2.98387096774194 371 21 99 0 2 372 5563 5193 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1110 569 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;