RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA670521" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA670521 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5742002 5742002 PRJNA670521_P_NODE_92765_length_241_cov_0.916667_g92020_i0 PRJNA670521 92765 241 0.916667 2.20916747 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 67.6 7.75e-7   NTclustered gi|2794965319|ref|XM_067866530.1| 2049356 g92020 i0 91.667 0.398340248962656 48 4 20 0 7 54 211 258 Monocercomonoides exilis putative 40S ribosomal protein S26-1 (MONOS_13796), mRNA blastn 96 67.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
8291480 8291480 PRJNA670521_P_NODE_65967_length_260_cov_0.909091_g65222_i0 PRJNA670521 65967 260 0.909091 2.3636366 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 167 8.109999999999999e-37   NTclustered gi|2794959186|ref|XM_067879425.1| 2049356 g65222 i0 79.412 43.7576923076923 238 47 91 2 24 260 885 1121 Monocercomonoides exilis putative Elongation factor 1-alpha (MONOS_8970), mRNA blastn 11377 167 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
17216111 17216111 PRJNA670521_P_NODE_38174_length_329_cov_2.070312_g37429_i0 PRJNA670521 38174 329 2.070312 6.81132648 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 5.14e-5   NTclustered gi|2794951030|ref|XM_067875178.1| 2049356 g37429 i0 91.111 1.16109422492401 45 4 14 0 198 242 2414 2458 Monocercomonoides exilis putative CMGC/MAPK protein kinase (MONOS_5059), partial mRNA blastn 382 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;