RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA669701" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA669701 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8288220 8288220 PRJNA669701_P_NODE_108367_length_251_cov_0.865169_g107972_i0 PRJNA669701 108367 251 0.865169 2.17157419 Brachionus plicatilis 10195 Rotifera other_Eukaryota 394 3.28e-105   NTclustered gi|1405682219|gb|MH231841.1| 10195 g107972 i0 95.181 0.99203187250996006 249 12 99 0 3 251 720 472 Brachionus plicatilis phosphatidylinositol 3-kinase catalytic subunit type 3 mRNA, complete cds blastn 249 394 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
8289530 8289530 PRJNA669701_P_NODE_81227_length_280_cov_2.231884_g80832_i0 PRJNA669701 81227 280 2.231884 6.2492752 Habrotrocha constricta 104786 Rotifera other_Eukaryota 303 6.45e-78   NTclustered gi|402761757|gb|JX184010.1| 104786 g80832 i0 86.594 10.3107142857143 276 35 98 2 1 275 323 49 Habrotrocha constricta cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 2887 303 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
10839163 10839163 PRJNA669701_P_NODE_112389_length_250_cov_0.870056_g111994_i0 PRJNA669701 112389 250 0.870056 2.17514 Brachionus plicatilis 10195 Rotifera other_Eukaryota 457 4.1099999999999985e-124   NTclustered gi|254587481|dbj|AB513493.1| 10195 g111994 i0 99.6 67.964 250 1 100 0 1 250 781 532 Brachionus plicatilis tef1a mRNA for translation elongation factor 1 alpha, complete cds blastn 16991 457 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
12114336 12114336 PRJNA669701_P_NODE_11330_length_710_cov_5.714286_g10952_i0 PRJNA669701 11330 710 5.714286 40.5714306 Philodina citrina 468664 Rotifera other_Eukaryota 726 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g10952 i0 85.356 22.0816901408451 717 87 100 15 1 710 1683 2388 Philodina citrina complete mitochondrial genome blastn 15678 726 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
18488001 18488001 PRJNA669701_P_NODE_28415_length_440_cov_12.365123_g28020_i0 PRJNA669701 28415 440 12.365123 54.4065412 Proales similis 360698 Rotifera other_Eukaryota 303 1.0600000000000001e-77   NTclustered gi|1859640894|gb|MN970216.1| 360698 g28020 i0 80.282 8.16363636363636 426 64 94 18 1 415 12100 12516 Proales similis mitochondrion, complete genome blastn 3592 303 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
21038442 21038442 PRJNA669701_P_NODE_53857_length_329_cov_4.210938_g53462_i0 PRJNA669701 53857 329 4.210938 13.85398602 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 331 3.55e-86   NTclustered gi|402761779|gb|JX184021.1| 104788 g53462 i0 85.489 37.8814589665653 317 46 96 0 11 327 1046 730 Macrotrachela quadricornifera isolate HR cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 12463 331 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
22312237 22312237 PRJNA669701_P_NODE_104038_length_254_cov_2.602210_g103643_i0 PRJNA669701 104038 254 2.60221 6.6096134 Habrotrocha constricta 104786 Rotifera other_Eukaryota 316 7.41e-82   NTclustered gi|402761725|gb|JX183994.1| 104786 g103643 i0 89.286 1.99212598425197 252 27 99 0 2 253 373 624 Habrotrocha constricta ATP synthase F0 subunit 6 (ATP6) gene, partial cds; mitochondrial blastn 506 316 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;