RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA669701" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA669701 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3185817 3185817 PRJNA669701_P_NODE_105083_length_253_cov_2.322222_g104688_i0 PRJNA669701 105083 253 2.322222 5.87522166 Gamsiella multidivaricata 101098 Fungi Fungi 230 9.879999999999999e-56   NTclustered gi|2323795340|ref|XM_051556909.1| 101098 g104688 i0 88.66 73.0790513833992 194 15 74 3 1 187 1192 1385 Gamsiella multidivaricata translation elongation factor EF-1 alpha (BC939DRAFT_460653), partial mRNA blastn 18489 230 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
5738369 5738369 PRJNA669701_P_NODE_106025_length_252_cov_2.229050_g105630_i0 PRJNA669701 106025 252 2.22905 5.617206 Mucor velutinosus 708070 Fungi Fungi 193 1.29e-44   NTclustered gi|2724925603|ref|XM_064830971.1| 708070 g105630 i0 82.096 0.908730158730159 229 38 91 1 1 229 787 1012 Mucor velutinosus uncharacterized protein (ATC70_011786), partial mRNA blastn 229 193 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
5738658 5738658 PRJNA669701_P_NODE_128925_length_245_cov_0.895349_g128530_i0 PRJNA669701 128925 245 0.895349 2.19360505 Rhizomucor pusillus 4840 Fungi Fungi 217 7.41e-52   NTclustered gi|2837743604|ref|XM_069379560.1| 4840 g128530 i0 84.305 63.1510204081633 223 33 91 2 17 238 222 1 Rhizomucor pusillus 60S ribosomal protein uL15 (VTP01DRAFT_1232), partial mRNA blastn 15472 217 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
5739903 5739903 PRJNA669701_P_NODE_90465_length_269_cov_2.515306_g90070_i0 PRJNA669701 90465 269 2.515306 6.76617314 Absidia healeyae 2733465 Fungi Fungi 320 6.12e-83   NTclustered gi|2175792831|gb|MW861733.1| 2733465 g90070 i0 88.104 96.8252788104089 269 32 100 0 1 269 1038 1306 Absidia healeyae strain UoMAU1 translation elongation factor 1-alpha (tef1) gene, complete cds blastn 26046 320 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia healeyae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;