contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA669701" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4463362 | 4463362 | PRJNA669701_P_NODE_145404_length_234_cov_2.093168_g145009_i0 | PRJNA669701 | 145404 | 234 | 2.093168 | 4.89801312 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 106 | 1.59e-18 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g145009 | i0 | 84.404 | 0.858974358974359 | 109 | 16 | 46 | 1 | 110 | 217 | 99935 | 100043 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 201 | 106 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5738478 | 5738478 | PRJNA669701_P_NODE_113725_length_249_cov_1.380682_g113330_i0 | PRJNA669701 | 113725 | 249 | 1.380682 | 3.43789818 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 237 | 5.8e-58 | NTclustered | gi|2107779373|gb|CP070829.1| | 2448054 | g113330 | i0 | 88.442 | 81.2610441767068 | 199 | 20 | 80 | 3 | 52 | 249 | 3228567 | 3228763 | MAG: Gemmatimonadales bacterium isolate bin109 chromosome | blastn | 20234 | 237 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 6268697 | 6268697 | PRJNA669701_P_NODE_95365_length_264_cov_1.486911_g94970_i0 | PRJNA669701 | 95365 | 264 | 1.486911 | 3.92544504 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 183 | 8.2e-42 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g94970 | i0 | 79.468 | 24.7424242424242 | 263 | 50 | 99 | 2 | 4 | 264 | 4412253 | 4411993 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 6532 | 183 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 9563666 | 9563666 | PRJNA669701_P_NODE_126328_length_245_cov_3.343023_g125933_i0 | PRJNA669701 | 126328 | 245 | 3.343023 | 8.19040635 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 246 | 9.449999999999999e-61 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g125933 | i0 | 85.081 | 116.74693877551 | 248 | 30 | 99 | 5 | 2 | 245 | 231561 | 231317 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 28603 | 246 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 9563979 | 9563979 | PRJNA669701_P_NODE_147748_length_226_cov_3.483660_g147353_i0 | PRJNA669701 | 147748 | 226 | 3.48366 | 7.8730716 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 171 | 5.32e-38 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g147353 | i0 | 81.604 | 70.6327433628319 | 212 | 33 | 92 | 6 | 7 | 215 | 2745479 | 2745687 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 15963 | 171 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 9564867 | 9564867 | PRJNA669701_P_NODE_86668_length_274_cov_1.467662_g86273_i0 | PRJNA669701 | 86668 | 274 | 1.467662 | 4.02139388 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 261 | 3.84e-65 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g86273 | i0 | 84.074 | 12.1934306569343 | 270 | 43 | 99 | 0 | 1 | 270 | 873804 | 874073 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 3341 | 261 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10092563 | 10092563 | PRJNA669701_P_NODE_145188_length_234_cov_3.161491_g144793_i0 | PRJNA669701 | 145188 | 234 | 3.161491 | 7.39788894 | FCB group | 1783270 | Bacteria | Bacteria | 183 | 7.119999999999998e-42 | NTclustered | gi|2107901501|gb|CP070815.1| | 2026742 | g144793 | i0 | 81.25 | 209.025641025641 | 240 | 33 | 99 | 8 | 1 | 231 | 1294635 | 1294871 | MAG: Gemmatimonadetes bacterium isolate bin118 chromosome | blastn | 48912 | 183 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 12115633 | 12115633 | PRJNA669701_P_NODE_87050_length_273_cov_3.085000_g86655_i0 | PRJNA669701 | 87050 | 273 | 3.085 | 8.42205 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 255 | 1.7800000000000001e-63 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g86655 | i0 | 83.577 | 5.26007326007326 | 274 | 43 | 100 | 2 | 1 | 273 | 2885220 | 2885492 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 1436 | 255 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 14665315 | 14665315 | PRJNA669701_P_NODE_85932_length_275_cov_1.301980_g85537_i0 | PRJNA669701 | 85932 | 275 | 1.30198 | 3.580445 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 364 | 2.859999999999999e-96 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g85537 | i0 | 91.078 | 85.2763636363636 | 269 | 24 | 98 | 0 | 1 | 269 | 802620 | 802352 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 23451 | 364 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 21038806 | 21038806 | PRJNA669701_P_NODE_80597_length_281_cov_1.480769_g80202_i0 | PRJNA669701 | 80597 | 281 | 1.480769 | 4.16096089 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 331 | 2.97e-86 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g80202 | i0 | 88.112 | 168.533807829181 | 286 | 25 | 100 | 8 | 1 | 281 | 252779 | 253060 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 47358 | 331 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;