RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA669701" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA669701 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1912485 1912485 PRJNA669701_P_NODE_83342_length_278_cov_1.253659_g82947_i0 PRJNA669701 83342 278 1.253659 3.48517202 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 254 6.54e-63   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g82947 i0 88.479 56.3381294964029 217 16 78 5 62 278 3916 3709 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 15662 254 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
14664564 14664564 PRJNA669701_P_NODE_25132_length_469_cov_1.530303_g24737_i0 PRJNA669701 25132 469 1.530303 7.17712107 Rosculus sp. VDelafont-2023a 3079709 SAR_Eukaryotes SAR_Eukaryotes 850 0   NTclustered gi|2589370978|gb|OR644361.1| 3079709 g24737 i0 99.36 40.8486140724947 469 3 100 0 1 469 1950 1482 Rosculus sp. VDelafont-2023a isolate AJ1 small subunit ribosomal RNA gene, partial sequence blastn 19158 850 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp. VDelafont-2023a
21038089 21038089 PRJNA669701_P_NODE_23237_length_488_cov_1.546988_g22842_i0 PRJNA669701 23237 488 1.546988 7.54930144 Rosculus sp. VDelafont-2023a 3079709 SAR_Eukaryotes SAR_Eukaryotes 874 0   NTclustered gi|2589370978|gb|OR644361.1| 3079709 g22842 i0 98.978 18.9672131147541 489 3 100 2 1 488 840 353 Rosculus sp. VDelafont-2023a isolate AJ1 small subunit ribosomal RNA gene, partial sequence blastn 9256 874 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp. VDelafont-2023a

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;