RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA669701" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA669701 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1912250 1912250 PRJNA669701_P_NODE_66502_length_303_cov_1.004348_g66107_i0 PRJNA669701 66502 303 1.004348 3.04317444 Halorussus caseinilyticus 3034025 Archaea Archaea 63.9 1.3e-5   NTclustered gi|2463595563|gb|CP119809.1| 3034025 g66107 i0 82.278 112.818481848185 79 9 24 3 24 97 2485099 2485021 Halorussus caseinilyticus strain DT72 chromosome, complete genome blastn 34184 63.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus caseinilyticus
3186397 3186397 PRJNA669701_P_NODE_148183_length_224_cov_4.748344_g147788_i0 PRJNA669701 148183 224 4.748344 10.63629056 Halococcus dombrowskii 179637 Archaea Archaea 202 1.87e-47   NTclustered gi|2221489803|gb|CP095005.1| 179637 g147788 i0 83.258 1.76339285714286 221 35 98 2 5 224 824902 824683 Halococcus dombrowskii strain H4 chromosome, complete genome blastn 395 202 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
4462848 4462848 PRJNA669701_P_NODE_107764_length_251_cov_0.865169_g107369_i0 PRJNA669701 107764 251 0.865169 2.17157419 Halogeometricum borinquense 60847 Archaea Archaea 80.5 1.04e-10   NTclustered gi|312294075|gb|CP001691.1| 469382 g107369 i0 80 0.47808764940239 120 14 45 7 138 251 11998 11883 Halogeometricum borinquense DSM 11551 plasmid pHBOR01, complete sequence blastn 120 80.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum borinquense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;