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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA669701" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA669701 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
635913 635913 PRJNA669701_P_NODE_41561_length_368_cov_1.427119_g41166_i0 PRJNA669701 41561 368 1.427119 5.25179792 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 641 1.63e-179   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g41166 i0 98.098 3.0054347826087 368 7 100 0 1 368 3624 3991 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1106 641 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3715512 3715512 PRJNA669701_P_NODE_121003_length_247_cov_0.885057_g120608_i0 PRJNA669701 121003 247 0.885057 2.18609079 Trypanosoma 5690 Euglenozoa other_Eukaryota 287 5.62e-73   NTclustered gi|686641248|ref|XM_009314795.1| 71804 g120608 i0 92.5 80.5991902834008 200 15 81 0 46 245 1355 1156 Trypanosoma grayi putative alpha tubulin partial mRNA blastn 19908 287 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
7014696 7014696 PRJNA669701_P_NODE_69426_length_296_cov_4.134529_g69031_i0 PRJNA669701 69426 296 4.134529 12.23820584 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 180 1.2099999999999999e-40   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g69031 i0 89.041 42.0236486486486 146 15 49 1 151 296 2901 3045 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12439 180 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
10093170 10093170 PRJNA669701_P_NODE_67608_length_300_cov_1.920705_g67213_i0 PRJNA669701 67608 300 1.920705 5.762115 Naegleria 5761 Heterolobosea other_Eukaryota 62.1 4.64e-5   NTclustered gi|2031946985|emb|OD958550.1| 5763 g67213 i0 100 10.5933333333333 33 0 11 0 54 86 4357 4325 Naegleria fowleri Karachi_NF001 strain blastn 3178 62.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
10839007 10839007 PRJNA669701_P_NODE_102289_length_256_cov_2.240437_g101894_i0 PRJNA669701 102289 256 2.240437 5.73551872 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 412 9.27e-111   NTclustered gi|290972517|ref|XM_002668953.1| 5762 g101894 i0 95.703 1 256 11 100 0 1 256 1032 777 Naegleria gruberi citrate synthase family member (NAEGRDRAFT_82269), mRNA blastn 256 412 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10839409 10839409 PRJNA669701_P_NODE_132049_length_244_cov_0.900585_g131654_i0 PRJNA669701 132049 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 396 8.829999999999997e-106   NTclustered gi|290974780|ref|XM_002670077.1| 5762 g131654 i0 95.902 1 244 10 100 0 1 244 724 481 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_81952), mRNA blastn 244 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13388927 13388927 PRJNA669701_P_NODE_104171_length_254_cov_2.116022_g103776_i0 PRJNA669701 104171 254 2.116022 5.37469588 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 425 1.18e-114   NTclustered gi|290971770|ref|XM_002668606.1| 5762 g103776 i0 96.85 1 254 8 100 0 1 254 936 683 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_60075), partial mRNA blastn 254 425 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13390015 13390015 PRJNA669701_P_NODE_58931_length_317_cov_1.909836_g58536_i0 PRJNA669701 58931 317 1.909836 6.05418012 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 128 4.8e-25   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g58536 i0 84.848 21.1514195583596 132 15 51 5 129 256 3188 3058 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6705 128 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
17214123 17214123 PRJNA669701_P_NODE_70014_length_295_cov_3.923423_g69619_i0 PRJNA669701 70014 295 3.923423 11.57409785 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 494 3.78e-135   NTclustered gi|290992886|ref|XM_002679019.1| 5762 g69619 i0 96.949 4.44067796610169 295 8 100 1 1 295 4 297 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36106), mRNA blastn 1310 494 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18488393 18488393 PRJNA669701_P_NODE_62135_length_310_cov_3.624473_g61740_i0 PRJNA669701 62135 310 3.624473 11.2358663 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 261 4.42e-65   NTclustered gi|290980060|ref|XM_002672705.1| 5762 g61740 i0 98 1.94838709677419 150 3 97 0 1 150 374 225 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_81126), partial mRNA blastn 604 261 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19762106 19762106 PRJNA669701_P_NODE_126596_length_245_cov_1.843023_g126201_i0 PRJNA669701 126596 245 1.843023 4.51540635 Paravahlkampfia sp. LA 373134 Heterolobosea other_Eukaryota 385 1.92e-102   NTclustered gi|89148136|gb|DQ388521.1| 373134 g126201 i0 95.122 47.5714285714286 246 9 100 2 1 245 1539 1296 Paravahlkampfia sp. LA 16S small subunit ribosomal RNA gene, partial sequence blastn 11655 385 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia sp. LA
22312987 22312987 PRJNA669701_P_NODE_29178_length_434_cov_4.678670_g28783_i0 PRJNA669701 29178 434 4.67867 20.3054278 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 797 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g28783 i0 99.77 24.5207373271889 434 1 100 0 1 434 1866 2299 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10642 797 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;