RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA667863" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA667863 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7012461 7012461 PRJNA667863_P_NODE_1286_length_457_cov_5.247396_g1252_i0 PRJNA667863 1286 457 5.247396 23.98059972 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 220 1.15e-52   NTclustered gi|294933094|ref|XM_002780549.1| 423536 g1252 i0 78.916 74.5010940919037 332 65 72 5 78 407 595 267 Perkinsus marinus ATCC 50983 40S ribosomal protein S5, putative, mRNA blastn 34047 220 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
17212125 17212125 PRJNA667863_P_NODE_8654_length_266_cov_1.507772_g8620_i0 PRJNA667863 8654 266 1.507772 4.01067352 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 163 1.08e-35   NTclustered gi|294953922|ref|XM_002787921.1| 423536 g8620 i0 79.399 8.26691729323308 233 46 87 2 24 255 172 403 Perkinsus marinus ATCC 50983 60S ribosomal protein L11, putative, mRNA blastn 2199 163 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;