RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA667863" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA667863 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5737453 5737453 PRJNA667863_P_NODE_3085_length_347_cov_1.620438_g3051_i0 PRJNA667863 3085 347 1.620438 5.62291986 Cerebratulus lacteus 6221 Nemertea other_Eukaryota 67.6 1.17e-6   NTclustered gi|937555908|gb|KR336530.1| 6221 g3051 i0 82.051 0.22478386167147 78 14 22 0 24 101 471 394 Cerebratulus lacteus tropomyosin mRNA, complete cds blastn 78 67.6 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Cerebratulus Cerebratulus lacteus
14663040 14663040 PRJNA667863_P_NODE_8432_length_267_cov_3.365979_g8398_i0 PRJNA667863 8432 267 3.365979 8.98716393 Lineus longissimus 88925 Nemertea other_Eukaryota 224 4.8899999999999987e-54   NTclustered gi|2724586890|ref|XM_064772396.1| 88925 g8398 i0 82.129 96.0861423220974 263 45 98 2 3 264 154 415 PREDICTED: Lineus longissimus dynein light chain Tctex-type 1 (LOC135488026), transcript variant X2, mRNA blastn 25655 224 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
23586642 23586642 PRJNA667863_P_NODE_1279_length_458_cov_5.628571_g1245_i0 PRJNA667863 1279 458 5.628571 25.77885518 Lineus longissimus 88925 Nemertea other_Eukaryota 86.1 4.38e-12   NTclustered gi|2724597022|ref|XM_064777617.1| 88925 g1245 i0 89.552 0.146288209606987 67 7 15 0 384 450 8702 8636 PREDICTED: Lineus longissimus mesocentin-like (LOC135491646), mRNA blastn 67 86.1 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;