RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA667863" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA667863 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
633984 633984 PRJNA667863_P_NODE_11061_length_252_cov_1.396648_g11027_i0 PRJNA667863 11061 252 1.396648 3.51955296 Diadema antillarum 105358 Echinodermata other_Eukaryota 180 1e-40   NTclustered gi|2919507701|ref|XM_071650991.1| 105358 g11027 i0 80.081 23.9642857142857 246 45 97 4 6 249 11311 11554 PREDICTED: Diadema antillarum dynein axonemal heavy chain 2-like (LOC139740398), mRNA blastn 6039 180 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
1910306 1910306 PRJNA667863_P_NODE_9662_length_259_cov_5.440860_g9628_i0 PRJNA667863 9662 259 5.44086 14.0918274 Patiria miniata 46514 Echinodermata other_Eukaryota 178 3.73e-40   NTclustered gi|1944897900|ref|XM_038206757.1| 46514 g9628 i0 79.231 9.08108108108108 260 50 99 4 1 258 542 799 PREDICTED: Patiria miniata rRNA 2'-O-methyltransferase fibrillarin-like (LOC119733178), transcript variant X1, mRNA blastn 2352 178 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
4461867 4461867 PRJNA667863_P_NODE_15804_length_243_cov_0.905882_g15770_i0 PRJNA667863 15804 243 0.905882 2.20129326 Asterias rubens 7604 Echinodermata other_Eukaryota 84.2 7.77e-12   NTclustered gi|1834264232|ref|XM_033771074.1| 7604 g15770 i0 83.908 0.358024691358025 87 14 36 0 8 94 362 448 PREDICTED: Asterias rubens transmembrane emp24 domain-containing protein 2-like (LOC117289885), mRNA blastn 87 84.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
7012626 7012626 PRJNA667863_P_NODE_8106_length_270_cov_1.177665_g8072_i0 PRJNA667863 8106 270 1.177665 3.1796955 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 268 2.2599999999999994e-67   NTclustered gi|2037943933|ref|XM_041618991.1| 7654 g8072 i0 84.926 55.7074074074074 272 33 99 6 1 268 2237 2504 PREDICTED: Lytechinus variegatus cilia- and flagella-associated protein 57-like (LOC121423609), mRNA blastn 15041 268 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
9562528 9562528 PRJNA667863_P_NODE_6168_length_286_cov_2.145540_g6134_i0 PRJNA667863 6168 286 2.14554 6.1362444 Acanthaster planci 133434 Echinodermata other_Eukaryota 169 2.52e-37   NTclustered gi|1229160721|ref|XM_022237579.1| 133434 g6134 i0 82.234 25.8146853146853 197 33 69 2 1 196 4830 4635 PREDICTED: Acanthaster planci clathrin heavy chain 1 (LOC110980684), mRNA blastn 7383 169 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
19760969 19760969 PRJNA667863_P_NODE_5516_length_294_cov_1.162896_g5482_i0 PRJNA667863 5516 294 1.162896 3.41891424 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 71.3 7.53e-8   NTclustered gi|1752352510|ref|XM_030981733.1| 7668 g5482 i0 90.741 0.36734693877551 54 4 18 1 24 77 5504 5452 PREDICTED: Strongylocentrotus purpuratus DNA-directed RNA polymerase II subunit RPB1-like (LOC105446803), mRNA blastn 108 71.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
21036538 21036538 PRJNA667863_P_NODE_5477_length_294_cov_2.194570_g5443_i0 PRJNA667863 5477 294 2.19457 6.4520358 Acanthaster planci 133434 Echinodermata other_Eukaryota 255 1.94e-63   NTclustered gi|1229148110|ref|XM_022230790.1| 133434 g5443 i0 82.699 16.1258503401361 289 49 98 1 1 289 1579 1292 PREDICTED: Acanthaster planci cilia- and flagella-associated protein 58-like (LOC110977030), mRNA blastn 4741 255 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;