RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA667863" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA667863 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
633978 633978 PRJNA667863_P_NODE_10761_length_253_cov_2.266667_g10727_i0 PRJNA667863 10761 253 2.266667 5.73466751 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|1778032705|ref|XM_031697798.1| 6105 g10727 i0 100 0.114624505928854 29 0 11 0 23 51 771 799 PREDICTED: Actinia tenebrosa probable U3 small nucleolar RNA-associated protein 11 (LOC116290697), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
2438812 2438812 PRJNA667863_P_NODE_3362_length_339_cov_1.063910_g3328_i0 PRJNA667863 3362 339 1.06391 3.6066549 Pocillopora 46730 Cnidaria other_Eukaryota 54.7 0.009   NTclustered gi|1524859678|ref|XM_027181014.1| 46731 g3328 i0 94.444 0.31858407079646 36 0 10 2 114 148 10393 10427 PREDICTED: Pocillopora damicornis prolow-density lipoprotein receptor-related protein 1-like (LOC113665335), partial mRNA blastn 108 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
3184802 3184802 PRJNA667863_P_NODE_1103_length_482_cov_10.056235_g1070_i0 PRJNA667863 1103 482 10.056235 48.4710527 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 357 8.89e-94   NTclustered gi|1778059731|ref|XM_031711301.1| 6105 g1070 i0 80.795 83.2738589211618 453 87 94 0 16 468 105 557 PREDICTED: Actinia tenebrosa ubiquitin-40S ribosomal protein S27a (LOC116302103), mRNA blastn 40138 357 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
19760902 19760902 PRJNA667863_P_NODE_18336_length_229_cov_2.500000_g18302_i0 PRJNA667863 18336 229 2.5 5.725 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.02   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g18302 i0 100 0.244541484716157 28 0 12 0 108 135 6379094 6379121 Anemonia sulcata genome assembly, chromosome: 18 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;