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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA667863" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA667863 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1910217 1910217 PRJNA667863_P_NODE_3162_length_344_cov_2.221402_g3128_i0 PRJNA667863 3162 344 2.221402 7.64162288 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 473 5.859999999999999e-129   NTclustered gi|110645063|gb|DQ665311.1| 151077 g3128 i0 91.57 61.6598837209302 344 27 99 2 1 343 785 1127 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 21211 473 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
3184945 3184945 PRJNA667863_P_NODE_4343_length_315_cov_2.409091_g4309_i0 PRJNA667863 4343 315 2.409091 7.58863665 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 364 3.3299999999999986e-96   NTclustered gi|300521444|gb|GQ377690.1| 151077 g4309 i0 87.619 25.9047619047619 315 37 99 2 2 315 587 274 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 8160 364 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
3715214 3715214 PRJNA667863_P_NODE_17803_length_234_cov_3.080745_g17769_i0 PRJNA667863 17803 234 3.080745 7.2089433 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 433 6.41e-117   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g17769 i0 100 30.6196581196581 234 0 100 0 1 234 1389 1156 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 7165 433 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
4461969 4461969 PRJNA667863_P_NODE_6864_length_279_cov_11.859223_g6830_i0 PRJNA667863 6864 279 11.859223 33.08723217 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 346 1.05e-90   NTclustered gi|110645063|gb|DQ665311.1| 151077 g6830 i0 93.534 6.76344086021505 232 15 83 0 48 279 1 232 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 1887 346 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
7012576 7012576 PRJNA667863_P_NODE_426_length_711_cov_5.695925_g397_i0 PRJNA667863 426 711 5.695925 40.49802675 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 651 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g397 i0 84.328 48.2095639943741 670 99 94 5 45 711 1205 539 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 34277 651 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8287305 8287305 PRJNA667863_P_NODE_5447_length_295_cov_1.171171_g5413_i0 PRJNA667863 5447 295 1.171171 3.45495445 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 237 7.040000000000001e-58   NTclustered gi|110277428|gb|DQ662856.1| 151077 g5413 i0 82.182 33.7525423728814 275 49 93 0 1 275 1378 1104 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 9957 237 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9562370 9562370 PRJNA667863_P_NODE_11868_length_250_cov_0.870056_g11834_i0 PRJNA667863 11868 250 0.870056 2.17514 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 351 1.99e-92   NTclustered gi|829192317|ref|XM_001031469.3| 312017 g11834 i0 92 1 250 20 100 0 1 250 457 208 Tetrahymena thermophila SB210 40S ribosomal protein S19 partial mRNA blastn 250 351 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
9562512 9562512 PRJNA667863_P_NODE_4928_length_304_cov_1.333333_g4894_i0 PRJNA667863 4928 304 1.333333 4.05333232 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 300 9.16e-77   NTclustered gi|300521444|gb|GQ377690.1| 151077 g4894 i0 84.641 9.21381578947368 306 41 99 6 2 304 370 672 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 2801 300 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
13917503 13917503 PRJNA667863_P_NODE_2551_length_367_cov_5.772109_g2517_i0 PRJNA667863 2551 367 5.772109 21.18364003 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 584 2.779999999999999e-162   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2517 i0 95.368 67.9509536784741 367 17 100 0 1 367 435 69 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 24938 584 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
18486378 18486378 PRJNA667863_P_NODE_19115_length_211_cov_4.144928_g19081_i0 PRJNA667863 19115 211 4.144928 8.74579808 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 289 1.2999999999999999e-73   NTclustered gi|300521444|gb|GQ377690.1| 151077 g19081 i0 91.827 0.985781990521327 208 15 98 2 1 207 384 178 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 208 289 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
18486384 18486384 PRJNA667863_P_NODE_19395_length_203_cov_4.353846_g19361_i0 PRJNA667863 19395 203 4.353846 8.83830738 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 106 1.34e-18   NTclustered gi|110277428|gb|DQ662856.1| 151077 g19361 i0 79.355 24.2807881773399 155 28 75 4 48 200 624 472 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 4929 106 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19760895 19760895 PRJNA667863_P_NODE_17296_length_240_cov_2.305389_g17262_i0 PRJNA667863 17296 240 2.305389 5.5329336 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 350 6.839999999999999e-92   NTclustered gi|158347525|gb|EU047814.1| 151077 g17262 i0 92.917 98.1333333333333 240 17 100 0 1 240 613 374 Chilodonella uncinata clone Shared_P1 beta-tubulin gene, partial cds; macronuclear blastn 23552 350 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
21036386 21036386 PRJNA667863_P_NODE_1217_length_466_cov_1.625954_g1184_i0 PRJNA667863 1217 466 1.625954 7.57694564 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 664 0   NTclustered gi|347439291|gb|JN111994.1| 151077 g1184 i0 92.308 99.8412017167382 468 34 100 1 1 466 677 210 Chilodonella uncinata strain Pol alpha-tubulin (atub) gene, partial cds; macronuclear blastn 46526 664 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
21036555 21036555 PRJNA667863_P_NODE_6817_length_280_cov_1.487923_g6783_i0 PRJNA667863 6817 280 1.487923 4.1661844 Sterkiella nova 200597 SAR_Eukaryotes SAR_Eukaryotes 246 1.1e-60   NTclustered gi|1051275|gb|U37280.1|ONU37280 200597 g6783 i0 82.734 37.5142857142857 278 46 99 2 4 280 1676 1952 Oxytricha nova Hsp70 gene, complete cds blastn 10504 246 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella nova
22311368 22311368 PRJNA667863_P_NODE_5098_length_301_cov_1.675439_g5064_i0 PRJNA667863 5098 301 1.675439 5.04307139 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 518 2.3e-142   NTclustered gi|1837628855|gb|MN158348.1| 5909 g5064 i0 97.674 91.3056478405316 301 7 100 0 1 301 4524 4224 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 27483 518 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
23586769 23586769 PRJNA667863_P_NODE_3339_length_339_cov_3.180451_g3305_i0 PRJNA667863 3339 339 3.180451 10.78172889 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 488 2.06e-133   NTclustered gi|512134942|gb|JX178901.1| 1295638 g3305 i0 93.617 84.0648967551622 329 17 96 4 1 327 1148 1474 Vorticella sp. 4 JG-2011 clone 1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28498 488 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
24860253 24860253 PRJNA667863_P_NODE_5660_length_291_cov_2.788991_g5626_i0 PRJNA667863 5660 291 2.788991 8.11596381 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 333 8.6e-87   NTclustered gi|300676719|gb|GQ377693.1| 151077 g5626 i0 87.329 1.00343642611684 292 36 100 1 1 291 318 27 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 292 333 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;