RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA666695" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA666695 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
630711 630711 PRJNA666695_S_NODE_135681_length_188_cov_1.564626_g134587_i0 PRJNA666695 135681 188 1.564626 2.94149688 Nematocida parisii 586133 Fungi Fungi 58.4 3.46e-4   NTclustered gi|906375813|ref|XR_001214622.1| 881290 g134587 i0 89.583 0.425531914893617 48 1 24 3 66 110 2692 2646 Nematocida parisii ERTm1 28S ribosomal RNA (NEPG_02678), partial rRNA blastn 80 58.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida parisii
13384958 13384958 PRJNA666695_S_NODE_149391_length_178_cov_1.489051_g148297_i0 PRJNA666695 149391 178 1.489051 2.65051078 Ovipleistophora ovariae 103445 Fungi Fungi 67.6 5.38e-7   NTclustered gi|2017842940|gb|MW811106.1| 103445 g148297 i0 87.719 4.11797752808989 57 7 32 0 12 68 2643 2587 Ovipleistophora ovariae isolate 2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 733 67.6 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Ovipleistophora Ovipleistophora ovariae
20289242 20289242 PRJNA666695_S_NODE_21436_length_404_cov_6.369146_g20343_i0 PRJNA666695 21436 404 6.369146 25.73134984 Microsporidium 144516 Fungi Fungi 128 6.26e-25   NTclustered gi|2054360413|gb|MZ405814.1| 546760 g20343 i0 85.484 22.6683168316832 124 16 30 2 206 328 256 378 Uncultured Microsporidia clone OTU_3806 small subunit ribosomal RNA gene, partial sequence blastn 9158 128 1 Eukaryota Opisthokonta Fungi Microsporidia         uncultured Microsporidia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;