RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA666695" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 7 ✖

bioproject 1

  • PRJNA666695 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1907673 1907673 PRJNA666695_S_NODE_180382_length_158_cov_2.752137_g179288_i0 PRJNA666695 180382 158 2.752137 4.34837646 Bosavirus sp. 2340908 Viruses Viruses 292 7.07e-75   NTclustered gi|1761171183|gb|MN180054.1| 2340908 g179288 i0 100 6 158 0 100 0 1 158 558 401 Bosavirus sp. strain VRI_1, complete genome blastn 948 292 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Bosavirus sp.
7540841 7540841 PRJNA666695_S_NODE_32146_length_347_cov_6.977124_g31052_i0 PRJNA666695 32146 347 6.977124 24.21062028 Copiparvovirus 1511888 Viruses Viruses 625 1.5399999999999999e-174   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g31052 i0 99.135 4.49567723342939 347 3 100 0 1 347 5356 5010 Bosavirus MS-2016a, complete genome blastn 1560 625 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5
12112786 12112786 PRJNA666695_S_NODE_91230_length_229_cov_2.675532_g90136_i0 PRJNA666695 91230 229 2.675532 6.12696828 Copiparvovirus ungulate1 3052142 Viruses Viruses 390 3.81e-104   NTclustered gi|2277478546|gb|MZ502227.1| 172296 g90136 i0 97.38 12.1441048034935 229 6 100 0 1 229 5278 5050 Bovine parvovirus - 2 isolate FBS2/USA nonstructural protein and structural protein genes, complete cds blastn 2781 390 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate1
12112881 12112881 PRJNA666695_S_NODE_95490_length_224_cov_3.726776_g94396_i0 PRJNA666695 95490 224 3.726776 8.34797824 Erythroparvovirus ungulate1 3052194 Viruses Viruses 409 1.03e-109   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g94396 i0 99.554 9.00446428571429 224 1 100 0 1 224 1994 2217 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 2017 409 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
14662045 14662045 PRJNA666695_S_NODE_72352_length_253_cov_2.816038_g71258_i0 PRJNA666695 72352 253 2.816038 7.12457614 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.006   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g71258 i0 100 0.889328063241107 29 0 11 0 223 251 29 1 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 225 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
18485093 18485093 PRJNA666695_S_NODE_55095_length_282_cov_5.958506_g54001_i0 PRJNA666695 55095 282 5.958506 16.80298692 TTV-like mini virus 93678 Viruses Viruses 52.8 0.026   NTclustered gi|2164984279|gb|MN769747.1| 93678 g54001 i0 100 0.099290780141844 28 0 10 0 116 143 94 67 MAG: TTV-like mini virus isolate SAfiA-810-50, complete genome blastn 28 52.8 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Betatorquevirus TTV-like mini virus
19757980 19757980 PRJNA666695_S_NODE_15636_length_456_cov_5.486747_g14545_i0 PRJNA666695 15636 456 5.486747 25.01956632 Erythroparvovirus ungulate1 3052194 Viruses Viruses 821 0   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g14545 i0 99.123 8.97368421052632 456 4 100 0 1 456 3342 3797 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 4092 821 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;