contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA666695" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 630982 | 630982 | PRJNA666695_S_NODE_149561_length_178_cov_1.343066_g148467_i0 | PRJNA666695 | 149561 | 178 | 1.343066 | 2.39065748 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 100 | 5.3e-17 | NTclustered | gi|2108353487|gb|CP070655.1| | 2035772 | g148467 | i0 | 81.746 | 0.707865168539326 | 126 | 17 | 69 | 6 | 20 | 142 | 686699 | 686821 | MAG: Candidatus Omnitrophota bacterium isolate bin81 chromosome | blastn | 126 | 100 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 3714251 | 3714251 | PRJNA666695_S_NODE_135383_length_188_cov_2.129252_g134289_i0 | PRJNA666695 | 135383 | 188 | 2.129252 | 4.00299376 | Planctomycetia | 203683 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g134289 | i0 | 100 | 0.446808510638298 | 28 | 0 | 15 | 0 | 35 | 62 | 7487899 | 7487926 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 84 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 4461377 | 4461377 | PRJNA666695_S_NODE_88344_length_232_cov_3.497382_g87250_i0 | PRJNA666695 | 88344 | 232 | 3.497382 | 8.11392624 | Sedimentisphaerales bacterium | 2813034 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|2621705864|emb|OY763926.1| | 2813034 | g87250 | i0 | 100 | 0.120689655172414 | 28 | 0 | 12 | 0 | 85 | 112 | 271248 | 271275 | MAG: Sedimentisphaerales bacterium isolate 7f5c64f7-1a0d-4936-834e-775057159072 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaerales bacterium | |||
| 6266680 | 6266680 | PRJNA666695_S_NODE_184465_length_156_cov_1.982609_g183371_i0 | PRJNA666695 | 184465 | 156 | 1.982609 | 3.09287004 | Opitutaceae | 134623 | Bacteria | Bacteria | 254 | 3.28e-63 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g183371 | i0 | 96.711 | 41.8397435897436 | 152 | 5 | 97 | 0 | 3 | 154 | 1903699 | 1903548 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 6527 | 255 | 0.996078431372549 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 10835987 | 10835987 | PRJNA666695_S_NODE_22069_length_399_cov_716.106145_g20976_i0 | PRJNA666695 | 22069 | 399 | 716.106145 | 2857.26351855 | uncultured Ruficoccus sp. | 2175960 | Bacteria | Bacteria | 379 | 1.54e-100 | NTclustered | gi|2907625921|emb|OZ223481.1| | 2175960 | g20976 | i0 | 84.478 | 298.100250626566 | 393 | 52 | 97 | 8 | 12 | 399 | 741226 | 740838 | MAG: uncultured Ruficoccus sp. isolate b2a3d85c-2e17-47e2-9e32-7ac6437316b9 genome assembly, chromosome: 10 | blastn | 118942 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Ruficoccus | uncultured Ruficoccus sp. | |
| 15932858 | 15932858 | PRJNA666695_S_NODE_103213_length_216_cov_2.931429_g102119_i0 | PRJNA666695 | 103213 | 216 | 2.931429 | 6.33188664 | Aquisphaera giovannonii | 406548 | Bacteria | Bacteria | 283 | 6.21e-72 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g102119 | i0 | 90.455 | 55.1666666666667 | 220 | 14 | 100 | 7 | 1 | 216 | 5180414 | 5180198 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 11916 | 283 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 18482792 | 18482792 | PRJNA666695_S_NODE_122555_length_198_cov_2.968153_g121461_i0 | PRJNA666695 | 122555 | 198 | 2.968153 | 5.87694294 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 278 | 2.6e-70 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g121461 | i0 | 93.617 | 135.257575757576 | 188 | 9 | 94 | 3 | 12 | 198 | 4212472 | 4212287 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 26781 | 278 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 19014090 | 19014090 | PRJNA666695_S_NODE_130555_length_192_cov_1.523179_g129461_i0 | PRJNA666695 | 130555 | 192 | 1.523179 | 2.92450368 | Coraliomargarita | 442430 | Bacteria | Bacteria | 126 | 9.6e-25 | NTclustered | gi|470486190|ref|NR_076741.1| | 395922 | g129461 | i0 | 87.85 | 140.359375 | 107 | 13 | 56 | 0 | 13 | 119 | 1324 | 1430 | Coraliomargarita akajimensis strain 04OKA010-24 23S ribosomal RNA gene, complete sequence | blastn | 26949 | 126 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Coraliomargarita | Coraliomargarita akajimensis | |
| 19758885 | 19758885 | PRJNA666695_S_NODE_25816_length_377_cov_1.642857_g24723_i0 | PRJNA666695 | 25816 | 377 | 1.642857 | 6.19357089 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 411 | 5.139999999999999e-110 | NTclustered | gi|2891482117|emb|OZ219851.1| | 2026772 | g24723 | i0 | 86.458 | 129.519893899204 | 384 | 41 | 100 | 11 | 1 | 377 | 1410399 | 1410020 | MAG: Opitutales bacterium isolate e4292735-b3b5-42df-bce3-ad3ef7a88f44 genome assembly, chromosome: 10 | blastn | 48829 | 411 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 24857105 | 24857105 | PRJNA666695_S_NODE_145660_length_180_cov_5.294964_g144566_i0 | PRJNA666695 | 145660 | 180 | 5.294964 | 9.5309352 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 233 | 5.08e-57 | NTclustered | gi|2874254020|emb|OY970345.1| | 412056 | g144566 | i0 | 90.11 | 59.0777777777778 | 182 | 15 | 100 | 3 | 1 | 180 | 3893393 | 3893573 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 | blastn | 10634 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;