RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA666695" and tax_clade = "Metamonada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 17 ✖

bioproject 1

  • PRJNA666695 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1908958 1908958 PRJNA666695_S_NODE_58122_length_276_cov_12.212766_g57028_i0 PRJNA666695 58122 276 12.212766 33.70723416 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 52.8 0.025   NTclustered gi|2794895333|ref|XM_067923466.1| 135588 g57028 i0 100 0.101449275362319 28 0 10 0 1 28 601 574 Histomonas meleagridis XYPPX repeat family protein (GO595_009747), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
4459598 4459598 PRJNA666695_S_NODE_189224_length_153_cov_3.919643_g188130_i0 PRJNA666695 189224 153 3.919643 5.99705379 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.003   NTclustered gi|2794954083|ref|XM_067876555.1| 2049356 g188130 i0 100 0.189542483660131 29 0 19 0 122 150 2852 2880 Monocercomonoides exilis putative poly glycohydrolase (MONOS_633), mRNA blastn 29 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
4461545 4461545 PRJNA666695_S_NODE_95124_length_225_cov_1.750000_g94030_i0 PRJNA666695 95124 225 1.75 3.9375 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.02   NTclustered gi|2806447930|ref|XM_068499353.1| 1144522 g94030 i0 100 0.124444444444444 28 0 12 0 166 193 1329 1302 Tritrichomonas foetus uncharacterized protein (TRFO_17050), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
7010514 7010514 PRJNA666695_S_NODE_24746_length_382_cov_23.504399_g23653_i0 PRJNA666695 24746 382 23.504399 89.78680418 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 7.83e-4   NTclustered gi|2794962939|ref|XM_067866283.1| 2049356 g23653 i0 100 0.175392670157068 31 0 8 0 59 89 1609 1579 Monocercomonoides exilis uncharacterized protein (MONOS_1357), mRNA blastn 67 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
9559697 9559697 PRJNA666695_S_NODE_163688_length_168_cov_3.259843_g162594_i0 PRJNA666695 163688 168 3.259843 5.47653624 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 111 2.3e-20   NTclustered gi|2794937743|ref|XM_067865583.1| 2049356 g162594 i0 78.571 3.00595238095238 168 36 100 0 1 168 526 359 Monocercomonoides exilis Vacuolar protein sorting 4F (Vps4F) (MONOS_12922), partial mRNA blastn 505 111 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
9559991 9559991 PRJNA666695_S_NODE_180168_length_158_cov_4.324786_g179074_i0 PRJNA666695 180168 158 4.324786 6.83316188 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 63.9 6.03e-6   NTclustered gi|2794977606|ref|XM_067878625.1| 2049356 g179074 i0 91.304 1.42405063291139 46 4 29 0 7 52 4211 4166 Monocercomonoides exilis putative Tubulin polyglutamylase TTLL13 (MONOS_8233), partial mRNA blastn 225 63.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
9561108 9561108 PRJNA666695_S_NODE_51028_length_291_cov_3.312000_g49934_i0 PRJNA666695 51028 291 3.312 9.63792 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 52.8 0.027   NTclustered gi|2319633734|ref|XM_001328002.2| 412133 g49934 i0 100 0.0962199312714777 28 0 10 0 261 288 288 315 Trichomonas vaginalis G3 inner centromere protein, ARK binding region-containing protein (TVAGG3_0259540), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
10836205 10836205 PRJNA666695_S_NODE_29429_length_359_cov_2.981132_g28336_i0 PRJNA666695 29429 359 2.981132 10.70226388 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.034   NTclustered gi|2806473247|ref|XM_068508863.1| 1144522 g28336 i0 100 0.0779944289693593 28 0 8 0 3 30 216 189 Tritrichomonas foetus eukaryotic release factor 3 GTPase subunit (TRFO_33069), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
10837676 10837676 PRJNA666695_S_NODE_93389_length_227_cov_1.731183_g92295_i0 PRJNA666695 93389 227 1.731183 3.92978541 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 60.2 1.21e-4   NTclustered gi|2794864018|ref|XM_067915123.1| 135588 g92295 i0 85.965 0.251101321585903 57 7 25 1 85 141 507 452 Histomonas meleagridis small GTP-binding protein (GO595_002236), partial mRNA blastn 57 60.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
13386056 13386056 PRJNA666695_S_NODE_27991_length_365_cov_18.746914_g26898_i0 PRJNA666695 27991 365 18.746914 68.4262361 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 7.45e-4   NTclustered gi|2794962939|ref|XM_067866283.1| 2049356 g26898 i0 100 1.65479452054795 31 0 8 0 59 89 1609 1579 Monocercomonoides exilis uncharacterized protein (MONOS_1357), mRNA blastn 604 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
14662306 14662306 PRJNA666695_S_NODE_84552_length_237_cov_2.183673_g83458_i0 PRJNA666695 84552 237 2.183673 5.17530501 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 60.2 1.27e-4   NTclustered gi|2794937327|ref|XM_067873823.1| 2049356 g83458 i0 94.737 0.160337552742616 38 2 16 0 8 45 742 779 Monocercomonoides exilis uncharacterized protein (MONOS_3800), partial mRNA blastn 38 60.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
14662315 14662315 PRJNA666695_S_NODE_85072_length_236_cov_3.374359_g83978_i0 PRJNA666695 85072 236 3.374359 7.96348724 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 4.55e-4   NTclustered gi|2794976598|ref|XM_067873005.1| 2049356 g83978 i0 100 0.13135593220339 31 0 13 0 8 38 3854 3824 Monocercomonoides exilis putative phosphatidylcholine-sterol O-acyltransferase (MONOS_3035), partial mRNA blastn 31 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
15936481 15936481 PRJNA666695_S_NODE_96513_length_223_cov_3.032967_g95419_i0 PRJNA666695 96513 223 3.032967 6.76351641 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.002   NTclustered gi|2794950794|ref|XM_067876726.1| 2049356 g95419 i0 100 0.134529147982063 30 0 13 0 47 76 3322 3351 Monocercomonoides exilis uncharacterized protein (MONOS_6487), mRNA blastn 30 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
21033923 21033923 PRJNA666695_S_NODE_175557_length_161_cov_2.208333_g174463_i0 PRJNA666695 175557 161 2.208333 3.55541613 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.001   NTclustered gi|2794960793|ref|XM_067879059.1| 2049356 g174463 i0 100 0.186335403726708 30 0 19 0 125 154 5569 5540 Monocercomonoides exilis uncharacterized protein (MONOS_8632), mRNA blastn 30 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
21034215 21034215 PRJNA666695_S_NODE_191137_length_152_cov_3.801802_g190043_i0 PRJNA666695 191137 152 3.801802 5.77873904 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.012   NTclustered gi|2794959641|ref|XM_067867817.1| 2049356 g190043 i0 100 0.184210526315789 28 0 18 0 58 85 1570 1597 Monocercomonoides exilis uncharacterized protein (MONOS_14974), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
22308393 22308393 PRJNA666695_S_NODE_156918_length_173_cov_1.393939_g155824_i0 PRJNA666695 156918 173 1.393939 2.41151447 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.015   NTclustered gi|2806482628|ref|XM_068495444.1| 1144522 g155824 i0 100 0.161849710982659 28 0 16 0 23 50 200 173 Tritrichomonas foetus uncharacterized protein (TRFO_10413), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
23584567 23584567 PRJNA666695_S_NODE_20879_length_408_cov_6.008174_g19786_i0 PRJNA666695 20879 408 6.008174 24.51334992 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 54.7 0.011   NTclustered gi|2794859708|ref|XM_067913970.1| 135588 g19786 i0 100 0.071078431372549 29 0 7 0 310 338 761 733 Histomonas meleagridis Arf GTPase activating protein (GO595_000120), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;