RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA666695" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA666695 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9561528 9561528 PRJNA666695_S_NODE_68328_length_259_cov_2.954128_g67234_i0 PRJNA666695 68328 259 2.954128 7.65119152 Candidatus Absconditicoccus praedator 2735562 Bacteria Bacteria 52.8 0.024   NTclustered gi|2160621446|gb|CP054059.1| 2735562 g67234 i0 100 0.108108108108108 28 0 11 0 224 251 174894 174867 Candidatus Absconditicoccus praedator strain M39-6 chromosome, complete genome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales Candidatus Absconditicoccaceae Candidatus Absconditicoccus Candidatus Absconditicoccus praedator
14662495 14662495 PRJNA666695_S_NODE_9292_length_562_cov_3.641075_g8279_i0 PRJNA666695 9292 562 3.641075 20.4628415 Minisyncoccus archaeiphilus 3238481 Bacteria Bacteria 91.6 1.17e-13   NTclustered gi|2849250805|dbj|AP038758.1| 3238481 g8279 i0 84.783 0.784697508896797 92 13 16 1 428 519 752380 752470 Candidatus Minisyncoccus archaeophilus PMX.108 DNA, complete genome blastn 441 91.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Minisyncoccales Minisyncoccaceae Minisyncoccus Minisyncoccus archaeiphilus
17209458 17209458 PRJNA666695_S_NODE_175254_length_161_cov_2.866667_g174160_i0 PRJNA666695 175254 161 2.866667 4.61533387 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 78.7 2.21e-10   NTclustered gi|2874253743|emb|OY969586.1| 2052149 g174160 i0 82.955 29.7888198757764 88 13 53 2 48 133 2020442 2020529 MAG: Candidatus Aminicenantes bacterium isolate MFD10007.bin.c.2 genome assembly, chromosome: 1 blastn 4796 78.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
21035761 21035761 PRJNA666695_S_NODE_79677_length_243_cov_2.732673_g78583_i0 PRJNA666695 79677 243 2.732673 6.64039539 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 52.8 0.022   NTclustered gi|2874253892|emb|OY970067.1| 991135 g78583 i0 100 0.11522633744856 28 0 12 0 181 208 5575090 5575063 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;