RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA666695" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA666695 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9559156 9559156 PRJNA666695_S_NODE_135088_length_188_cov_2.816327_g133994_i0 PRJNA666695 135088 188 2.816327 5.29469476 Thecamonas trahens 529818 Root_unresolved Root_unresolved 54.7 0.004   NTclustered gi|923136139|ref|XM_013906081.1| 461836 g133994 i0 96.875 0.319148936170213 32 1 17 0 81 112 49 18 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_01482), mRNA blastn 60 54.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14662074 14662074 PRJNA666695_S_NODE_73452_length_251_cov_6.190476_g72358_i0 PRJNA666695 73452 251 6.190476 15.53809476 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|923123300|ref|XM_013899665.1| 461836 g72358 i0 100 0.119521912350598 30 0 12 0 222 251 1381 1352 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_08704), mRNA blastn 30 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;