RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA665531" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA665531 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1905285 1905285 PRJNA665531_P_NODE_10862_length_316_cov_1.473251_g10626_i0 PRJNA665531 10862 316 1.473251 4.65547316 Gemmataceae bacterium 2052164 Bacteria Bacteria 562 1.11e-155   NTclustered gi|2063814025|emb|LR586051.1| 2052164 g10626 i0 98.734 115.398734177215 316 4 100 0 1 316 319083 318768 Gemmata bacterium CJuql4 whole genome assembly and annotation blastn 36466 562 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
19756463 19756463 PRJNA665531_P_NODE_676_length_1343_cov_5.033858_g590_i0 PRJNA665531 676 1343 5.033858 67.60471294 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 1267 0   NTclustered gi|2076441902|gb|CP075368.1| 2026777 g590 i0 85.62 478.580789277736 1217 164 90 11 126 1337 2583090 2584300 MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome blastn 642734 1267 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;