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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA664479" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA664479 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1905266 1905266 PRJNA664479_S_NODE_5522_length_229_cov_1.133333_g5446_i0 PRJNA664479 5522 229 1.133333 2.59533257 Mytilus californianus 6549 Mollusca Mollusca 56.5 0.002   NTclustered gi|2334608986|ref|XM_052206883.1| 6549 g5446 i0 94.444 0.157205240174672 36 2 16 0 94 129 2645 2610 PREDICTED: Mytilus californianus RING finger protein 11-like (LOC127702581), mRNA blastn 36 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
5732618 5732618 PRJNA664479_S_NODE_4345_length_251_cov_0.792079_g4269_i0 PRJNA664479 4345 251 0.792079 1.98811829 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912984370|dbj|AP039589.1| 145626 g4269 i0 92.5 0.159362549800797 40 2 16 1 36 75 44708170 44708132 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 8, sequence blastn 40 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
8282384 8282384 PRJNA664479_S_NODE_4947_length_238_cov_1.555556_g4871_i0 PRJNA664479 4947 238 1.555556 3.70222328 Crassostrea virginica 6565 Mollusca Mollusca 54.7 0.006   NTclustered gi|1242736601|ref|XM_022440247.1| 6565 g4871 i0 96.97 0.138655462184874 33 0 13 1 38 69 2708 2740 PREDICTED: Crassostrea virginica hypermethylated in cancer 2 protein-like (LOC111105807), transcript variant X1, mRNA blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
10833270 10833270 PRJNA664479_S_NODE_15489_length_165_cov_1.758621_g15413_i0 PRJNA664479 15489 165 1.758621 2.90172465 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.001   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g15413 i0 97.059 0.206060606060606 34 0 20 1 25 57 10695165 10695198 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 34 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
19756070 19756070 PRJNA664479_S_NODE_1076_length_455_cov_4.396552_g1000_i0 PRJNA664479 1076 455 4.396552 20.0043116 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.044   NTclustered gi|2912998015|dbj|AP039603.1| 145626 g1000 i0 100 0.0615384615384615 28 0 6 0 357 384 36268190 36268217 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 22, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
21031690 21031690 PRJNA664479_S_NODE_12277_length_175_cov_3.095238_g12201_i0 PRJNA664479 12277 175 3.095238 5.4166665 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.015   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g12201 i0 100 0.16 28 0 16 0 142 169 38455029 38455002 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23581797 23581797 PRJNA664479_S_NODE_15839_length_165_cov_0.879310_g15763_i0 PRJNA664479 15839 165 0.87931 1.4508615 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.014   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g15763 i0 100 0.16969696969697 28 0 17 0 93 120 2800684 2800657 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;