RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA664479" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA664479 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5732617 5732617 PRJNA664479_S_NODE_19045_length_161_cov_0.866071_g18969_i0 PRJNA664479 19045 161 0.866071 1.39437431 Vanrija pseudolonga 143232 Fungi Fungi 209 7.5e-50   NTclustered gi|2669736104|ref|XM_062769951.1| 143232 g18969 i0 90.123 2.01242236024845 162 14 100 2 1 161 2540 2380 Vanrija pseudolonga uncharacterized protein (LOC62_02G003417), mRNA blastn 324 209 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
8282380 8282380 PRJNA664479_S_NODE_18647_length_161_cov_0.910714_g18571_i0 PRJNA664479 18647 161 0.910714 1.46624954 Vanrija pseudolonga 143232 Fungi Fungi 248 1.59e-61   NTclustered gi|2669723298|ref|XM_062767771.1| 143232 g18571 i0 94.41 1 161 9 100 0 1 161 327 167 Vanrija pseudolonga Esterase (est_3), mRNA blastn 161 248 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
13383208 13383208 PRJNA664479_S_NODE_15771_length_165_cov_0.879310_g15695_i0 PRJNA664479 15771 165 0.87931 1.4508615 Vanrija pseudolonga 143232 Fungi Fungi 261 2.11e-65   NTclustered gi|2669724360|ref|XM_062767952.1| 143232 g15695 i0 99.306 5.1030303030303 144 1 87 0 18 161 129 272 Vanrija pseudolonga Heat shock protein 70 (SPAC57A7.12), mRNA blastn 842 261 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
17207207 17207207 PRJNA664479_S_NODE_17894_length_162_cov_0.902655_g17818_i0 PRJNA664479 17894 162 0.902655 1.4623011 Malassezia restricta 76775 Fungi Fungi 300 4.36e-77   NTclustered gi|1546635979|ref|XM_027629632.1| 76775 g17818 i0 100 1 162 0 100 0 1 162 646 485 Malassezia restricta activating transcription factor 7 interacting protein (MRET_3005), partial mRNA blastn 162 300 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24855399 24855399 PRJNA664479_S_NODE_14700_length_167_cov_0.864407_g14624_i0 PRJNA664479 14700 167 0.864407 1.44355969 Malassezia restricta 76775 Fungi Fungi 303 3.5e-78   NTclustered gi|1546632462|ref|XM_027627891.1| 76775 g14624 i0 99.401 94.3652694610778 167 1 100 0 1 167 1136 970 Malassezia restricta heat shock 70kDa protein 1/2/6/8 (MRET_1264), partial mRNA blastn 15759 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;