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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA664479" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 25 ✖

bioproject 1

  • PRJNA664479 · 25 ✖

analysis 1

  • blastn · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1162226 1162226 PRJNA664479_S_NODE_16341_length_164_cov_1.156522_g16265_i0 PRJNA664479 16341 164 1.156522 1.89669608 Setaria 4554 Plants Plants 52.8 0.014   NTclustered gi|1256417653|ref|XM_004960968.3| 4555 g16265 i0 100 0.341463414634146 28 0 17 0 126 153 125 98 PREDICTED: Setaria italica cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG-like (LOC101766458), mRNA blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Setaria Setaria italica
1905265 1905265 PRJNA664479_S_NODE_18922_length_161_cov_0.910714_g18846_i0 PRJNA664479 18922 161 0.910714 1.46624954 Solanum lycopersicum 4081 Plants Plants 298 1.56e-76   NTclustered gi|392841230|gb|AC246645.7| 4081 g18846 i0 100 1 161 0 100 0 1 161 53246 53406 Solanum lycopersicum strain Heinz 1706 chromosome 1 clone slm-49l1 map 1, complete sequence blastn 161 298 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
4457069 4457069 PRJNA664479_S_NODE_12264_length_175_cov_4.230159_g12188_i0 PRJNA664479 12264 175 4.230159 7.40277825 Lupinus angustifolius 3871 Plants Plants 52.8 0.015   NTclustered gi|1117456837|ref|XR_002105945.1| 3871 g12188 i0 96.774 0.885714285714286 31 1 18 0 138 168 1088 1118 PREDICTED: Lupinus angustifolius acidic leucine-rich nuclear phosphoprotein 32-related protein-like (LOC109332806), transcript variant X4, misc_RNA blastn 155 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lupinus Lupinus angustifolius
4457075 4457075 PRJNA664479_S_NODE_17144_length_163_cov_0.894737_g17068_i0 PRJNA664479 17144 163 0.894737 1.45842131 Fagopyrum esculentum 3617 Plants Plants 147 6.0599999999999996e-31   NTclustered gi|270272190|gb|GU130001.1| 3617 g17068 i0 82.822 10.3312883435583 163 28 100 0 1 163 20 182 Fagopyrum esculentum legumin-like protein mRNA, partial cds blastn 1684 147 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Polygonaceae Fagopyrum Fagopyrum esculentum
5732612 5732612 PRJNA664479_S_NODE_14565_length_167_cov_0.864407_g14489_i0 PRJNA664479 14565 167 0.864407 1.44355969 Pinus taeda 3352 Plants Plants 215 1.69e-51   NTclustered gi|297747464|gb|AC241351.1| 3352 g14489 i0 89.881 1.0059880239521 168 15 100 2 1 167 120331 120165 Pinus taeda clone PT_7Ba4290D18, complete sequence blastn 168 215 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Pinus Pinus taeda
7007783 7007783 PRJNA664479_S_NODE_17926_length_162_cov_0.902655_g17850_i0 PRJNA664479 17926 162 0.902655 1.4623011 Triticum aestivum 4565 Plants Plants 267 4.419999999999999e-67   NTclustered gi|1282798539|gb|MG560142.1| 4565 g17850 i0 96.296 5 162 6 100 0 1 162 631607 631768 Triticum aestivum omega gliadin-D1, omega gliadin-D2, omega gliadin-D3, gamma gliadin-D1, delta gliadin-D1, gamma gliadin-D2, gamma gliadin-D3, gamma gliadin-D4, LMW-D1, LMW-D2, LMW-D3, LMW-D6, and LMW-D7 genes, complete cds blastn 810 267 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
7007786 7007786 PRJNA664479_S_NODE_2606_length_307_cov_12.310078_g2530_i0 PRJNA664479 2606 307 12.310078 37.79193946 Calluna vulgaris 13385 Plants Plants 56.5 0.002   NTclustered gi|2917566876|emb|OZ228610.1| 13385 g2530 i0 97.059 0.657980456026059 34 0 11 1 133 165 49713335 49713368 Calluna vulgaris genome assembly, chromosome: 7 blastn 202 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Calluna Calluna vulgaris
7007788 7007788 PRJNA664479_S_NODE_3326_length_279_cov_2.586957_g3250_i0 PRJNA664479 3326 279 2.586957 7.21761003 Cephalomitrion aterrimum 1527703 Plants Plants 119 2.5000000000000002e-22   NTclustered gi|671724742|gb|KF851759.1| 1527703 g3250 i0 91.765 44.2508960573477 85 7 43 0 129 213 237 321 Cephalomitrion aterrimum isolate L1226 26S large subunit ribosomal RNA gene, partial sequence blastn 12346 119 1 Eukaryota Embryophyta Viridiplantae Streptophyta Jungermanniopsida Jungermanniales Cephaloziellaceae Cephalomitrion Cephalomitrion aterrimum
7007795 7007795 PRJNA664479_S_NODE_9846_length_189_cov_1.092857_g9770_i0 PRJNA664479 9846 189 1.092857 2.06549973 Ipomoea nil 35883 Plants Plants 58.4 3.49e-4   NTclustered gi|1109197592|ref|XM_019294223.1| 35883 g9770 i0 90.909 0.412698412698413 44 3 23 1 55 97 127 170 PREDICTED: Ipomoea nil putative glycine-rich cell wall structural protein 1 (LOC109146556), mRNA blastn 78 58.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Ipomoea Ipomoea nil
8282370 8282370 PRJNA664479_S_NODE_13467_length_170_cov_1.264463_g13391_i0 PRJNA664479 13467 170 1.264463 2.1495871 Brassica oleracea 3712 Plants Plants 52.8 0.014   NTclustered gi|1516555473|emb|LR031873.1| 3712 g13391 i0 100 0.164705882352941 28 0 16 0 73 100 33301957 33301984 Brassica oleracea HDEM genome, scaffold: C4 blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica oleracea
8282376 8282376 PRJNA664479_S_NODE_17267_length_163_cov_0.894737_g17191_i0 PRJNA664479 17267 163 0.894737 1.45842131 Cucumis melo 3656 Plants Plants 86.1 1.34e-12   NTclustered gi|733591281|emb|LN681806.1| 3656 g17191 i0 97.959 1.53374233128834 49 1 57 0 59 107 2883797 2883749 Cucumis melo genomic scaffold, anchoredscaffold00025 blastn 250 86.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
8282377 8282377 PRJNA664479_S_NODE_17527_length_163_cov_0.894737_g17451_i0 PRJNA664479 17527 163 0.894737 1.45842131 Ipomoea triloba 35885 Plants Plants 132 1.7e-26   NTclustered gi|1766814296|ref|XM_031255134.1| 35885 g17451 i0 81.875 25.0245398773006 160 25 97 4 5 162 295 452 PREDICTED: Ipomoea triloba 60S ribosomal protein L23-like (LOC116015121), mRNA blastn 4079 132 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Ipomoea Ipomoea triloba
10833267 10833267 PRJNA664479_S_NODE_11749_length_178_cov_1.581395_g11673_i0 PRJNA664479 11749 178 1.581395 2.8148831 Rutidosis leptorrhynchoides 125765 Plants Plants 52.8 0.015   NTclustered gi|2922576363|ref|XM_071879525.1| 125765 g11673 i0 100 0.471910112359551 28 0 16 0 91 118 1327 1300 PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein (LOC139896878), transcript variant X1, mRNA blastn 84 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Rutidosis Rutidosis leptorrhynchoides
10833269 10833269 PRJNA664479_S_NODE_13029_length_172_cov_1.235772_g12953_i0 PRJNA664479 13029 172 1.235772 2.12552784 Cucumis sativus 3659 Plants Plants 54.7 0.004   NTclustered gi|1784882558|ref|XM_004143577.3| 3659 g12953 i0 100 0.168604651162791 29 0 17 0 88 116 478 450 PREDICTED: Cucumis sativus BAG family molecular chaperone regulator 2 (LOC101207502), mRNA blastn 29 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis sativus
12108492 12108492 PRJNA664479_S_NODE_5250_length_233_cov_2.342391_g5174_i0 PRJNA664479 5250 233 2.342391 5.45777103 Ribes rubrum 175228 Plants Plants 52.8 0.021   NTclustered gi|2918370030|emb|OZ237958.1| 175228 g5174 i0 100 0.120171673819742 28 0 12 0 184 211 66157878 66157851 Ribes rubrum genome assembly, chromosome: 8 blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Saxifragales Grossulariaceae Ribes Ribes rubrum
17207200 17207200 PRJNA664479_S_NODE_1054_length_461_cov_2.868932_g978_i0 PRJNA664479 1054 461 2.868932 13.22577652 Oryza sativa 4530 Plants Plants 52.8 0.045   NTclustered gi|2668294540|dbj|AP027395.1| 1771142 g978 i0 100 0.0607375271149675 28 0 6 0 63 90 21488206 21488179 Oryza sativa indica subgroup Inn Ma Yebaw DNA, chromosome: 11 blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
18481550 18481550 PRJNA664479_S_NODE_10035_length_188_cov_0.863309_g9959_i0 PRJNA664479 10035 188 0.863309 1.62302092 Impatiens glandulifera 253017 Plants Plants 52.8 0.016   NTclustered gi|2217228804|ref|XM_047478146.1| 253017 g9959 i0 94.286 0.186170212765957 35 1 18 1 139 172 362 328 PREDICTED: Impatiens glandulifera LOB domain-containing protein 14-like (LOC124937816), mRNA blastn 35 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Balsaminaceae Impatiens Impatiens glandulifera
18481560 18481560 PRJNA664479_S_NODE_2155_length_336_cov_0.986063_g2079_i0 PRJNA664479 2155 336 0.986063 3.31317168 Typha angustifolia 59011 Plants Plants 604 1.9399999999999992e-168   NTclustered gi|61741968|gb|AY952385.1| 59011 g2079 i0 99.107 100.002976190476 336 3 100 0 1 336 1118 783 Typha angustifolia 18S ribosomal RNA gene, partial sequence blastn 33601 604 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Typhaceae Typha Typha angustifolia
18481562 18481562 PRJNA664479_S_NODE_355_length_752_cov_2.384068_g298_i0 PRJNA664479 355 752 2.384068 17.92819136 Calluna vulgaris 13385 Plants Plants 54.7 0.021   NTclustered gi|2917531254|emb|OZ224585.1| 13385 g298 i0 100 0.038563829787234 29 0 4 0 372 400 46849746 46849774 Calluna vulgaris genome assembly, chromosome: 6 blastn 29 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Calluna Calluna vulgaris
21031697 21031697 PRJNA664479_S_NODE_5897_length_224_cov_0.868571_g5821_i0 PRJNA664479 5897 224 0.868571 1.94559904 Calluna vulgaris 13385 Plants Plants 54.7 0.006   NTclustered gi|2917535065|emb|OZ224586.1| 13385 g5821 i0 100 0.129464285714286 29 0 13 0 91 119 44949631 44949603 Calluna vulgaris genome assembly, chromosome: 7 blastn 29 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Calluna Calluna vulgaris
21031698 21031698 PRJNA664479_S_NODE_8697_length_197_cov_0.810811_g8621_i0 PRJNA664479 8697 197 0.810811 1.59729767 Aristolochia californica 171875 Plants Plants 104 4.64e-18   NTclustered gi|2811324983|ref|XM_068793660.1| 171875 g8621 i0 82.759 0.588832487309645 116 20 59 0 2 117 1411 1296 PREDICTED: Aristolochia californica polyubiquitin (LOC137947850), mRNA blastn 116 104 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Piperales Aristolochiaceae Aristolochia Aristolochia californica
22306454 22306454 PRJNA664479_S_NODE_12378_length_175_cov_1.214286_g12302_i0 PRJNA664479 12378 175 1.214286 2.1250005 Phyllostachys edulis 38705 Plants Plants 324 2.83e-84   NTclustered gi|242388190|emb|FP094850.1| 38705 g12302 i0 100 1 175 0 100 0 1 175 1013 839 Phyllostachys edulis cDNA clone: bphyem103d09, full insert sequence blastn 175 324 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phyllostachys Phyllostachys edulis
22306456 22306456 PRJNA664479_S_NODE_14458_length_167_cov_0.864407_g14382_i0 PRJNA664479 14458 167 0.864407 1.44355969 Benincasa hispida 102211 Plants Plants 89.8 1.07e-13   NTclustered gi|1955864069|ref|XM_039034032.1| 102211 g14382 i0 90 0.419161676646707 70 6 42 1 84 153 1512 1444 PREDICTED: Benincasa hispida uncharacterized LOC120079705 (LOC120079705), mRNA blastn 70 89.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Benincasa Benincasa hispida
24114210 24114210 PRJNA664479_S_NODE_17039_length_163_cov_1.350877_g16963_i0 PRJNA664479 17039 163 1.350877 2.20192951 Eukaryota 2759 Plants Plants 71.3 3.75e-8   NTclustered gi|2649115748|ref|XM_062315601.1| 3517 g16963 i0 93.617 7.24539877300614 47 3 29 0 116 162 768 814 PREDICTED: Alnus glutinosa ADP,ATP carrier protein, mitochondrial (LOC133877335), mRNA blastn 1181 71.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Alnus Alnus glutinosa
24855411 24855411 PRJNA664479_S_NODE_7280_length_208_cov_1.264151_g7204_i0 PRJNA664479 7280 208 1.264151 2.62943408 Spinacia oleracea 3562 Plants Plants 54.7 0.005   NTclustered gi|2514611079|ref|XM_056839726.1| 3562 g7204 i0 96.97 0.158653846153846 33 0 15 1 95 126 835 803 PREDICTED: Spinacia oleracea uncharacterized LOC130470126 (LOC130470126), mRNA blastn 33 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Spinacia Spinacia oleracea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;