contig_metadata
40 rows where analysis = "blastn", bioproject = "PRJNA663960" and tax_phylum = "Kitrinoviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 628601 | 628601 | PRJNA663960_S_NODE_15201_length_293_cov_6.158537_g14965_i0 | PRJNA663960 | 15201 | 293 | 6.158537 | 18.04451341 | Pestivirus bovis | 3052619 | Viruses | Viruses | 503 | 6.24e-138 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g14965 | i0 | 97.611 | 99.8191126279863 | 293 | 7 | 100 | 0 | 1 | 293 | 10236 | 9944 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 29247 | 503 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1904783 | 1904783 | PRJNA663960_S_NODE_25762_length_238_cov_1.921466_g25526_i0 | PRJNA663960 | 25762 | 238 | 1.921466 | 4.57308908 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g25526 | i0 | 100 | 0.239495798319328 | 29 | 0 | 12 | 0 | 1 | 29 | 6 | 34 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 57 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 4990311 | 4990311 | PRJNA663960_S_NODE_1504_length_611_cov_6.682624_g1309_i0 | PRJNA663960 | 1504 | 611 | 6.682624 | 40.83083264 | Pestivirus | 11095 | Viruses | Viruses | 935 | 0 | NTclustered | gi|386285712|gb|JQ418633.1| | 11099 | g1309 | i0 | 94.272 | 94.152209492635 | 611 | 35 | 100 | 0 | 1 | 611 | 666 | 56 | Bovine viral diarrhea virus 1 isolate 08GB44-1 polyprotein gene, complete cds | blastn | 57527 | 935 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5732144 | 5732144 | PRJNA663960_S_NODE_26645_length_234_cov_4.032086_g26409_i0 | PRJNA663960 | 26645 | 234 | 4.032086 | 9.43508124 | Pestivirus tauri | 3052626 | Viruses | Viruses | 394 | 3.02e-105 | NTclustered | gi|1003702981|gb|KT875160.1| | 54315 | g26409 | i0 | 97.403 | 98.6623931623932 | 231 | 6 | 99 | 0 | 1 | 231 | 1137 | 1367 | Bovine viral diarrhea virus 2 isolate 75W polyprotein gene, complete cds | blastn | 23087 | 394 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 6265860 | 6265860 | PRJNA663960_S_NODE_2205_length_535_cov_2.704918_g1983_i0 | PRJNA663960 | 2205 | 535 | 2.704918 | 14.4713113 | Pestivirus | 11095 | Viruses | Viruses | 676 | 0 | NTclustered | gi|530291193|gb|KC963967.1| | 11099 | g1983 | i0 | 96.35 | 97.9644859813084 | 411 | 15 | 100 | 0 | 1 | 411 | 1521 | 1931 | Bovine viral diarrhea virus 1 isolate 12F004, complete genome | blastn | 52411 | 676 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7007203 | 7007203 | PRJNA663960_S_NODE_13606_length_304_cov_2.789883_g13370_i0 | PRJNA663960 | 13606 | 304 | 2.789883 | 8.48124432 | Pestivirus tauri | 3052626 | Viruses | Viruses | 518 | 2.32e-142 | NTclustered | gi|1540352901|gb|MH231142.1| | 54315 | g13370 | i0 | 97.368 | 99.8815789473684 | 304 | 8 | 100 | 0 | 1 | 304 | 884 | 581 | Bovine viral diarrhea virus 2 isolate Parker polyprotein gene, complete cds | blastn | 30364 | 518 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 7007222 | 7007222 | PRJNA663960_S_NODE_16346_length_286_cov_3.828452_g16110_i0 | PRJNA663960 | 16346 | 286 | 3.828452 | 10.94937272 | Pestivirus bovis | 3052619 | Viruses | Viruses | 507 | 4.69e-139 | NTclustered | gi|1129880519|gb|KX170627.1| | 11099 | g16110 | i0 | 98.601 | 33.0384615384615 | 286 | 4 | 100 | 0 | 1 | 286 | 295 | 10 | Bovine viral diarrhea virus 1 isolate V099 NS5A gene, partial cds | blastn | 9449 | 507 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8281745 | 8281745 | PRJNA663960_S_NODE_11207_length_323_cov_2.068841_g10971_i0 | PRJNA663960 | 11207 | 323 | 2.068841 | 6.68235643 | Pestivirus bovis | 3052619 | Viruses | Viruses | 508 | 1.5e-139 | NTclustered | gi|2127986428|gb|MW732738.1| | 11099 | g10971 | i0 | 95.046 | 97.7894736842105 | 323 | 16 | 100 | 0 | 1 | 323 | 8678 | 8356 | Bovine viral diarrhea virus 1 strain PI407, complete genome | blastn | 31586 | 508 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8281938 | 8281938 | PRJNA663960_S_NODE_35907_length_203_cov_1.467949_g35671_i0 | PRJNA663960 | 35907 | 203 | 1.467949 | 2.97993647 | Pestivirus tauri | 3052626 | Viruses | Viruses | 375 | 9.24e-100 | NTclustered | gi|1540352891|gb|MH231137.1| | 54315 | g35671 | i0 | 100 | 99.8177339901478 | 203 | 0 | 100 | 0 | 1 | 203 | 11643 | 11845 | Bovine viral diarrhea virus 2 isolate MadSpl polyprotein gene, complete cds | blastn | 20263 | 375 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 8282156 | 8282156 | PRJNA663960_S_NODE_8467_length_350_cov_4.194719_g8231_i0 | PRJNA663960 | 8467 | 350 | 4.194719 | 14.6815165 | Pestivirus tauri | 3052626 | Viruses | Viruses | 608 | 1.5599999999999995e-169 | NTclustered | gi|1540352891|gb|MH231137.1| | 54315 | g8231 | i0 | 98 | 99.7942857142857 | 350 | 7 | 100 | 0 | 1 | 350 | 4480 | 4131 | Bovine viral diarrhea virus 2 isolate MadSpl polyprotein gene, complete cds | blastn | 34928 | 608 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 12108045 | 12108045 | PRJNA663960_S_NODE_29890_length_222_cov_1.457143_g29654_i0 | PRJNA663960 | 29890 | 222 | 1.457143 | 3.23485746 | Pestivirus tauri | 3052626 | Viruses | Viruses | 405 | 1.31e-108 | NTclustered | gi|998226330|gb|KT832820.1| | 54315 | g29654 | i0 | 99.55 | 99.0630630630631 | 222 | 1 | 100 | 0 | 1 | 222 | 8325 | 8104 | Bovine viral diarrhea virus 2 strain USMARC-60767, complete genome | blastn | 21992 | 405 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 12641233 | 12641233 | PRJNA663960_S_NODE_1130_length_671_cov_3.987179_g961_i0 | PRJNA663960 | 1130 | 671 | 3.987179 | 26.75397109 | Pestivirus | 11095 | Viruses | Viruses | 1134 | 0 | NTclustered | gi|1408941652|gb|MH379224.1| | 11099 | g961 | i0 | 97.168 | 100 | 671 | 19 | 100 | 0 | 1 | 671 | 7117 | 6447 | Bovine viral diarrhea virus 1 isolate P6 polyprotein gene, partial cds | blastn | 67100 | 1134 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12641336 | 12641336 | PRJNA663960_S_NODE_43650_length_184_cov_1.671533_g43414_i0 | PRJNA663960 | 43650 | 184 | 1.671533 | 3.07562072 | Pestivirus | 11095 | Viruses | Viruses | 278 | 2.38e-70 | NTclustered | gi|77799881|dbj|AB111964.2| | 233886 | g43414 | i0 | 93.989 | 100.592391304348 | 183 | 11 | 99 | 0 | 2 | 184 | 1728 | 1910 | Bovine viral diarrhea virus 839cp gene for poryprotein, partai cds, strain: 839cp | blastn | 18509 | 279 | 0.996415770609319 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 13382694 | 13382694 | PRJNA663960_S_NODE_23111_length_250_cov_1.487685_g22875_i0 | PRJNA663960 | 23111 | 250 | 1.487685 | 3.7192125 | Pestivirus bovis | 3052619 | Viruses | Viruses | 366 | 7.12e-97 | NTclustered | gi|530291193|gb|KC963967.1| | 11099 | g22875 | i0 | 96 | 89.88 | 225 | 9 | 90 | 0 | 1 | 225 | 1736 | 1512 | Bovine viral diarrhea virus 1 isolate 12F004, complete genome | blastn | 22470 | 366 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 13382754 | 13382754 | PRJNA663960_S_NODE_3151_length_477_cov_8.595349_g2923_i0 | PRJNA663960 | 3151 | 477 | 8.595349 | 40.99981473 | Pestivirus bovis | 3052619 | Viruses | Viruses | 815 | 0 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g2923 | i0 | 97.484 | 100.136268343816 | 477 | 12 | 100 | 0 | 1 | 477 | 8230 | 7754 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 47765 | 815 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14657520 | 14657520 | PRJNA663960_S_NODE_15232_length_293_cov_4.073171_g14996_i0 | PRJNA663960 | 15232 | 293 | 4.073171 | 11.93439103 | Pestivirus tauri | 3052626 | Viruses | Viruses | 483 | 8.13e-132 | NTclustered | gi|1540352885|gb|MH231134.1| | 54315 | g14996 | i0 | 96.564 | 98.9590443686007 | 291 | 10 | 99 | 0 | 3 | 293 | 4877 | 4587 | Bovine viral diarrhea virus 2 isolate B9497 polyprotein gene, complete cds | blastn | 28995 | 483 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 14657595 | 14657595 | PRJNA663960_S_NODE_22972_length_250_cov_4.709360_g22736_i0 | PRJNA663960 | 22972 | 250 | 4.70936 | 11.7734 | Pestivirus tauri | 3052626 | Viruses | Viruses | 435 | 1.92e-117 | NTclustered | gi|1540352891|gb|MH231137.1| | 54315 | g22736 | i0 | 98 | 98.88 | 250 | 5 | 100 | 0 | 1 | 250 | 4578 | 4827 | Bovine viral diarrhea virus 2 isolate MadSpl polyprotein gene, complete cds | blastn | 24720 | 435 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 14657615 | 14657615 | PRJNA663960_S_NODE_25072_length_241_cov_1.577320_g24836_i0 | PRJNA663960 | 25072 | 241 | 1.57732 | 3.8013412 | Pestivirus tauri | 3052626 | Viruses | Viruses | 440 | 3.959999999999999e-119 | NTclustered | gi|1540352891|gb|MH231137.1| | 54315 | g24836 | i0 | 99.585 | 99.9917012448133 | 241 | 1 | 100 | 0 | 1 | 241 | 10726 | 10486 | Bovine viral diarrhea virus 2 isolate MadSpl polyprotein gene, complete cds | blastn | 24098 | 440 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 14657893 | 14657893 | PRJNA663960_S_NODE_6672_length_377_cov_1.430303_g6436_i0 | PRJNA663960 | 6672 | 377 | 1.430303 | 5.39224231 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 56.5 | 0.003 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g6436 | i0 | 100 | 0.153846153846154 | 30 | 0 | 8 | 0 | 6 | 35 | 6 | 35 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 58 | 56.5 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 15931426 | 15931426 | PRJNA663960_S_NODE_11513_length_320_cov_4.109890_g11277_i0 | PRJNA663960 | 11513 | 320 | 4.10989 | 13.151648 | Pestivirus bovis | 3052619 | Viruses | Viruses | 547 | 3.139999999999999e-151 | NTclustered | gi|642594|gb|L35849.1|BVDP125B | 11099 | g11277 | i0 | 97.5 | 99.98125 | 320 | 8 | 100 | 0 | 1 | 320 | 678 | 997 | Bovine viral diarrhea virus (strain Draper) p125 gene, partial cds | blastn | 31994 | 547 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15931451 | 15931451 | PRJNA663960_S_NODE_13753_length_303_cov_2.667969_g13517_i0 | PRJNA663960 | 13753 | 303 | 2.667969 | 8.08394607 | Pestivirus bovis | 3052619 | Viruses | Viruses | 499 | 8.389999999999998e-137 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g13517 | i0 | 96.37 | 98.4125412541254 | 303 | 11 | 100 | 0 | 1 | 303 | 1949 | 2251 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 29819 | 499 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15931624 | 15931624 | PRJNA663960_S_NODE_35633_length_204_cov_0.974522_g35397_i0 | PRJNA663960 | 35633 | 204 | 0.974522 | 1.98802488 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.005 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g35397 | i0 | 96.97 | 0.71078431372549 | 33 | 0 | 16 | 1 | 1 | 33 | 13 | 44 | Carnation latent virus isolate KL, complete genome | blastn | 145 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 16464869 | 16464869 | PRJNA663960_S_NODE_2013_length_550_cov_5.184891_g1798_i0 | PRJNA663960 | 2013 | 550 | 5.184891 | 28.5169005 | Pestivirus | 11095 | Viruses | Viruses | 891 | 0 | NTclustered | gi|404363563|gb|JX419398.1| | 11099 | g1798 | i0 | 95.985 | 99.6781818181818 | 548 | 22 | 99 | 0 | 1 | 548 | 10032 | 9485 | Bovine viral diarrhea virus 1 polyprotein gene, complete cds | blastn | 54823 | 894 | 0.996644295302013 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17206686 | 17206686 | PRJNA663960_S_NODE_22754_length_251_cov_6.029412_g22518_i0 | PRJNA663960 | 22754 | 251 | 6.029412 | 15.13382412 | Pestivirus bovis | 3052619 | Viruses | Viruses | 431 | 2.4999999999999996e-116 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g22518 | i0 | 97.61 | 86.4262948207171 | 251 | 6 | 100 | 0 | 1 | 251 | 3735 | 3985 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 21693 | 431 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17206870 | 17206870 | PRJNA663960_S_NODE_46454_length_178_cov_1.557252_g46218_i0 | PRJNA663960 | 46454 | 178 | 1.557252 | 2.77190856 | Pestivirus bovis | 3052619 | Viruses | Viruses | 296 | 6.3e-76 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g46218 | i0 | 96.629 | 98.7752808988764 | 178 | 6 | 100 | 0 | 1 | 178 | 10141 | 10318 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 17582 | 296 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17206915 | 17206915 | PRJNA663960_S_NODE_53234_length_166_cov_1.285714_g52998_i0 | PRJNA663960 | 53234 | 166 | 1.285714 | 2.13428524 | Pestivirus bovis | 3052619 | Viruses | Viruses | 279 | 5.86e-71 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g52998 | i0 | 96.988 | 100.89156626506 | 166 | 5 | 100 | 0 | 1 | 166 | 4554 | 4719 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 16748 | 279 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18480951 | 18480951 | PRJNA663960_S_NODE_14135_length_300_cov_4.830040_g13899_i0 | PRJNA663960 | 14135 | 300 | 4.83004 | 14.49012 | Pestivirus tauri | 3052626 | Viruses | Viruses | 527 | 3.799999999999999e-145 | NTclustered | gi|619325761|emb|HG426494.1| | 54315 | g13899 | i0 | 98.333 | 99.8766666666667 | 300 | 5 | 100 | 0 | 1 | 300 | 1045 | 746 | Bovine viral diarrhea virus 2, complete genome, isolate SH2210-23 | blastn | 29963 | 527 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 19755542 | 19755542 | PRJNA663960_S_NODE_17596_length_279_cov_1.370690_g17360_i0 | PRJNA663960 | 17596 | 279 | 1.37069 | 3.8242251 | Pestivirus bovis | 3052619 | Viruses | Viruses | 472 | 1.6599999999999998e-128 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g17360 | i0 | 97.133 | 99.8387096774194 | 279 | 8 | 100 | 0 | 1 | 279 | 9064 | 8786 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 27855 | 472 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19755627 | 19755627 | PRJNA663960_S_NODE_2676_length_503_cov_4.190789_g2451_i0 | PRJNA663960 | 2676 | 503 | 4.190789 | 21.07966867 | Pestivirus bovis | 3052619 | Viruses | Viruses | 817 | 0 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g2451 | i0 | 96.024 | 99.8051689860835 | 503 | 19 | 100 | 1 | 1 | 503 | 11877 | 11376 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 50202 | 817 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19755761 | 19755761 | PRJNA663960_S_NODE_47516_length_176_cov_1.317829_g47280_i0 | PRJNA663960 | 47516 | 176 | 1.317829 | 2.31937904 | Pestivirus bovis | 3052619 | Viruses | Viruses | 298 | 1.73e-76 | NTclustered | gi|800924312|gb|KP941581.1| | 11099 | g47280 | i0 | 97.175 | 100.460227272727 | 177 | 4 | 100 | 1 | 1 | 176 | 11195 | 11019 | Bovine viral diarrhea virus 1 strain USMARC-51998 polyprotein gene, complete cds | blastn | 17681 | 298 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19755800 | 19755800 | PRJNA663960_S_NODE_54696_length_164_cov_1.717949_g54460_i0 | PRJNA663960 | 54696 | 164 | 1.717949 | 2.81743636 | Pestivirus tauri | 3052626 | Viruses | Viruses | 287 | 3.45e-73 | NTclustered | gi|998226334|gb|KT832822.1| | 54315 | g54460 | i0 | 98.171 | 99.1585365853659 | 164 | 3 | 100 | 0 | 1 | 164 | 7219 | 7382 | Bovine viral diarrhea virus 2 strain USMARC-60779, complete genome | blastn | 16262 | 287 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 21564044 | 21564044 | PRJNA663960_S_NODE_237_length_1143_cov_14.479015_g171_i0 | PRJNA663960 | 237 | 1143 | 14.479015 | 165.49514145 | Pestivirus | 11095 | Viruses | Viruses | 1884 | 0 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g171 | i0 | 96.413 | 96.2134733158355 | 1143 | 41 | 100 | 0 | 1 | 1143 | 1220 | 78 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 109972 | 1884 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 22839531 | 22839531 | PRJNA663960_S_NODE_398_length_930_cov_19.108720_g171_i1 | PRJNA663960 | 398 | 930 | 19.10872 | 177.711096 | Pestivirus | 11095 | Viruses | Viruses | 1568 | 0 | NTclustered | gi|530291193|gb|KC963967.1| | 11099 | g171 | i1 | 97.097 | 97.0225806451613 | 930 | 27 | 100 | 0 | 1 | 930 | 1009 | 80 | Bovine viral diarrhea virus 1 isolate 12F004, complete genome | blastn | 90231 | 1568 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23581282 | 23581282 | PRJNA663960_S_NODE_17319_length_280_cov_3.781116_g17083_i0 | PRJNA663960 | 17319 | 280 | 3.781116 | 10.5871248 | Pestivirus bovis | 3052619 | Viruses | Viruses | 490 | 4.61e-134 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g17083 | i0 | 98.214 | 100.917857142857 | 280 | 5 | 100 | 0 | 1 | 280 | 4812 | 4533 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 28257 | 490 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23581341 | 23581341 | PRJNA663960_S_NODE_23539_length_248_cov_1.522388_g23303_i0 | PRJNA663960 | 23539 | 248 | 1.522388 | 3.77552224 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g23303 | i0 | 100 | 0.229838709677419 | 29 | 0 | 12 | 0 | 1 | 29 | 6 | 34 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 57 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 24113993 | 24113993 | PRJNA663960_S_NODE_2179_length_537_cov_2.397959_g1959_i0 | PRJNA663960 | 2179 | 537 | 2.397959 | 12.87703983 | Pestivirus | 11095 | Viruses | Viruses | 845 | 0 | NTclustered | gi|800924328|gb|KP941589.1| | 11099 | g1959 | i0 | 95.301 | 99.927374301676 | 532 | 25 | 99 | 0 | 6 | 537 | 10156 | 10687 | Bovine viral diarrhea virus 1 strain USMARC-55923 polyprotein gene, complete cds | blastn | 53661 | 845 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24114000 | 24114000 | PRJNA663960_S_NODE_23419_length_248_cov_3.701493_g23183_i0 | PRJNA663960 | 23419 | 248 | 3.701493 | 9.17970264 | Pestivirus | 11095 | Viruses | Viruses | 453 | 5.2600000000000005e-123 | NTclustered | gi|3786377|gb|AF039172.1|AF039172 | 11096 | g23183 | i0 | 99.597 | 97.6975806451613 | 248 | 1 | 100 | 0 | 1 | 248 | 85 | 332 | Pestivirus type 2 strain BVDV23025 5' untranslated region | blastn | 24229 | 453 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus suis | ||
| 24114046 | 24114046 | PRJNA663960_S_NODE_399_length_930_cov_18.492639_g171_i2 | PRJNA663960 | 399 | 930 | 18.492639 | 171.9815427 | Pestivirus | 11095 | Viruses | Viruses | 1557 | 0 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g171 | i2 | 96.882 | 97.0236559139785 | 930 | 29 | 100 | 0 | 1 | 930 | 1007 | 78 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 90232 | 1557 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24854925 | 24854925 | PRJNA663960_S_NODE_24540_length_243_cov_3.448980_g24304_i0 | PRJNA663960 | 24540 | 243 | 3.44898 | 8.3810214 | Pestivirus tauri | 3052626 | Viruses | Viruses | 399 | 6.789999999999999e-107 | NTclustered | gi|1540352885|gb|MH231134.1| | 54315 | g24304 | i0 | 96.296 | 99.5884773662551 | 243 | 9 | 100 | 0 | 1 | 243 | 9119 | 9361 | Bovine viral diarrhea virus 2 isolate B9497 polyprotein gene, complete cds | blastn | 24200 | 399 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 24854998 | 24854998 | PRJNA663960_S_NODE_3620_length_456_cov_10.383863_g3385_i0 | PRJNA663960 | 3620 | 456 | 10.383863 | 47.35041528 | Pestivirus tauri | 3052626 | Viruses | Viruses | 809 | 0 | NTclustered | gi|1540352891|gb|MH231137.1| | 54315 | g3385 | i0 | 98.684 | 98.9451754385965 | 456 | 6 | 100 | 0 | 1 | 456 | 536 | 991 | Bovine viral diarrhea virus 2 isolate MadSpl polyprotein gene, complete cds | blastn | 45119 | 809 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;