RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA662254" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA662254 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
628332 628332 PRJNA662254_P_NODE_47381_length_250_cov_0.870056_g46730_i0 PRJNA662254 47381 250 0.870056 2.17514 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 178 3.58e-40   NTclustered gi|2874253737|emb|OY969579.1| 3107663 g46730 i0 82.297 51.732 209 33 83 3 16 222 865903 865697 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD01689.bin.c.2 genome assembly, chromosome: 1 blastn 12933 178 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
13382394 13382394 PRJNA662254_P_NODE_49371_length_249_cov_0.875000_g48720_i0 PRJNA662254 49371 249 0.875 2.17875 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 255 1.6e-63   NTclustered gi|2874253953|emb|OY970278.1| 3107663 g48720 i0 87.963 2.00401606425703 216 26 87 0 1 216 2682626 2682841 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.10 genome assembly, chromosome: 1 blastn 499 255 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14657243 14657243 PRJNA662254_P_NODE_45692_length_251_cov_0.865169_g45041_i0 PRJNA662254 45692 251 0.865169 2.17157419 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 254 5.81e-63   NTclustered gi|2874253953|emb|OY970278.1| 3107663 g45041 i0 84.861 1 251 38 100 0 1 251 150246 150496 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.10 genome assembly, chromosome: 1 blastn 251 254 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14657247 14657247 PRJNA662254_P_NODE_46192_length_251_cov_0.865169_g45541_i0 PRJNA662254 46192 251 0.865169 2.17157419 Vulcanimicrobium alpinum 3016050 Bacteria Bacteria 252 2.09e-62   NTclustered gi|2416250577|dbj|AP025523.1| 3016050 g45541 i0 86.58 14.7450199203187 231 27 91 4 1 229 1318652 1318424 Vulcanimicrobium alpinum WC8-2 DNA, complete genome blastn 3701 252 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Vulcanimicrobium Vulcanimicrobium alpinum
17206444 17206444 PRJNA662254_P_NODE_63994_length_242_cov_0.899408_g63343_i0 PRJNA662254 63994 242 0.899408 2.17656736 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 183 7.41e-42   NTclustered gi|2874253824|emb|OY969808.1| 3107663 g63343 i0 82.301 6.06198347107438 226 26 90 13 18 236 2063967 2064185 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.1 genome assembly, chromosome: 1 blastn 1467 183 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23580989 23580989 PRJNA662254_P_NODE_48739_length_249_cov_0.875000_g48088_i0 PRJNA662254 48739 249 0.875 2.17875 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 154 6.01e-33   NTclustered gi|2874253878|emb|OY969933.1| 3107663 g48088 i0 81.026 1.06425702811245 195 35 78 2 29 222 2755385 2755192 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD05502.bin.c.2 genome assembly, chromosome: 1 blastn 265 154 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;