RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA662254" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA662254 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1161862 1161862 PRJNA662254_P_NODE_29461_length_306_cov_0.952790_g28810_i0 PRJNA662254 29461 306 0.95279 2.9155374 Mucorales 4827 Fungi Fungi 207 5.76e-49   NTclustered gi|2324052178|ref|XM_051530578.1| 90255 g28810 i0 79.538 66.0849673202614 303 52 97 7 9 306 687 390 Cokeromyces recurvatus heat shock protein 90-1 (BX663DRAFT_534690), mRNA blastn 20222 209 0.990430622009569 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
7007030 7007030 PRJNA662254_P_NODE_60286_length_243_cov_1.811765_g59635_i0 PRJNA662254 60286 243 1.811765 4.40258895 Lichtheimia ornata 688661 Fungi Fungi 148 2.72e-31   NTclustered gi|2553583265|ref|XM_058487133.1| 688661 g59635 i0 84.932 9.77777777777778 146 22 60 0 89 234 10 155 Lichtheimia ornata uncharacterized protein (O0I10_007113), partial mRNA blastn 2376 148 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
11365451 11365451 PRJNA662254_P_NODE_59589_length_244_cov_0.900585_g58938_i0 PRJNA662254 59589 244 0.900585 2.1974274 Lichtheimia 688353 Fungi Fungi 167 7.529999999999998e-37   NTclustered gi|11078117|gb|AF157225.1|AF157225 101563 g58938 i0 79.424 66.4426229508197 243 44 98 6 5 244 998 759 Absidia blakesleeana translation elongation factor 1-alpha (EF-1alpha) gene, partial cds blastn 16212 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia blakesleeana
15931241 15931241 PRJNA662254_P_NODE_55273_length_246_cov_0.890173_g54622_i0 PRJNA662254 55273 246 0.890173 2.18982558 Mucor velutinosus 708070 Fungi Fungi 158 4.58e-34   NTclustered gi|2724895857|ref|XM_064827795.1| 708070 g54622 i0 84.375 11.1382113821138 160 25 65 0 5 164 938 1097 Mucor velutinosus uncharacterized protein (ATC70_008548), partial mRNA blastn 2740 158 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
24854478 24854478 PRJNA662254_P_NODE_18980_length_376_cov_1.016502_g18329_i0 PRJNA662254 18980 376 1.016502 3.82204752 Rhizomucor pusillus 4840 Fungi Fungi 292 1.94e-74   NTclustered gi|2837743792|ref|XM_069379594.1| 4840 g18329 i0 83.654 40.7898936170213 312 49 83 2 65 375 1181 871 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_1263), partial mRNA blastn 15337 292 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;