RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA662254" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA662254 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1161852 1161852 PRJNA662254_P_NODE_17861_length_387_cov_3.993631_g17210_i0 PRJNA662254 17861 387 3.993631 15.45535197 Myxobolus 35588 Cnidaria other_Eukaryota 180 1.6199999999999996e-40   NTclustered gi|2663986577|emb|OY756918.1| 59785 g17210 i0 90.977 31.8733850129199 133 12 34 0 219 351 6556 6424 Myxobolus squamalis isolate 71B08 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 12335 180 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
4456309 4456309 PRJNA662254_P_NODE_59724_length_244_cov_0.900585_g59073_i0 PRJNA662254 59724 244 0.900585 2.1974274 Acropora millepora 45264 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2113840228|ref|XM_029337221.2| 45264 g59073 i0 100 0.114754098360656 28 0 11 0 132 159 2064 2091 PREDICTED: Acropora millepora histone-lysine N-methyltransferase SMYD3-like (LOC114959269), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
5731727 5731727 PRJNA662254_P_NODE_31765_length_295_cov_1.090090_g31114_i0 PRJNA662254 31765 295 1.09009 3.2157655 Hydra vulgaris 6087 Cnidaria other_Eukaryota 217 9.17e-52   NTclustered gi|2744794010|ref|XM_012698561.3| 6087 g31114 i0 82.47 9.2 251 40 84 4 47 295 496 248 PREDICTED: Hydra vulgaris small ribosomal subunit protein uS11 (LOC100201565), transcript variant X1, mRNA blastn 2714 217 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
8281389 8281389 PRJNA662254_P_NODE_11507_length_486_cov_8.145278_g10856_i0 PRJNA662254 11507 486 8.145278 39.58605108 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 809 0   NTclustered gi|681870004|gb|KM001687.1| 1542451 g10856 i0 99.774 40.738683127572 442 0 91 1 44 485 1 441 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 19799 809 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
8281610 8281610 PRJNA662254_P_NODE_6367_length_677_cov_9.221854_g5754_i0 PRJNA662254 6367 677 9.221854 62.43195158 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 1251 0   NTclustered gi|681870001|gb|KM001684.1| 1542451 g5754 i0 100 60.5036927621861 677 0 100 0 1 677 1870 2546 Myxidium streisingeri clone ZF2 18S small subunit ribosomal RNA gene, partial sequence blastn 40961 1251 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
10090566 10090566 PRJNA662254_P_NODE_6188_length_691_cov_1.092233_g5579_i0 PRJNA662254 6188 691 1.092233 7.54733003 Malacalcyonacea 3028843 Cnidaria other_Eukaryota 154 1.84e-32   NTclustered gi|8101942|gb|AF262347.1| 51768 g5579 i0 95.789 14.7684515195369 95 4 14 0 150 244 769 675 Alcyonium digitatum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10205 154 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Alcyoniidae Alcyonium Alcyonium digitatum
10832540 10832540 PRJNA662254_P_NODE_62189_length_242_cov_2.100592_g61538_i0 PRJNA662254 62189 242 2.100592 5.08343264 Sphaerospora angulata 1232752 Cnidaria other_Eukaryota 165 2.68e-36   NTclustered gi|444437440|gb|JX286637.1| 1232752 g61538 i0 87.857 5.3595041322314 140 17 58 0 84 223 1 140 Sphaerospora angulata isolate 4K2/01032011 elongation factor 2 (EF2) gene, partial cds blastn 1297 165 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaerosporidae Sphaerospora Sphaerospora angulata
12107633 12107633 PRJNA662254_P_NODE_34450_length_284_cov_4.573460_g33799_i0 PRJNA662254 34450 284 4.57346 12.9886264 Myxobolus sp. 'branchicola' 1446104 Cnidaria other_Eukaryota 215 3.16e-51   NTclustered gi|573041015|gb|JN616264.1| 1446104 g33799 i0 88.636 58.556338028169 176 20 62 0 1 176 3759 3584 Myxobolus sp. 'branchicola' voucher CQ-20090225 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16630 215 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus sp. 'branchicola'
13915918 13915918 PRJNA662254_P_NODE_4251_length_851_cov_3.141388_g3713_i0 PRJNA662254 4251 851 3.141388 26.73321188 Myxobolus 35588 Cnidaria other_Eukaryota 396 3.44e-105   NTclustered gi|2806899062|dbj|LC764547.1| 402991 g3713 i0 97.414 27.2820211515864 232 6 27 0 1 232 3329 3098 Myxobolus nagaraensis mx18004 gene for 28S rRNA, partial sequence, clone: mx18004lsu3 blastn 23217 396 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus nagaraensis
14657191 14657191 PRJNA662254_P_NODE_2532_length_1119_cov_7.329828_g2131_i0 PRJNA662254 2532 1119 7.329828 82.02077532 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 2056 0   NTclustered gi|681870005|gb|KM001688.1| 1542451 g2131 i0 99.821 37.2359249329759 1119 2 100 0 1 1119 1749 631 Myxidium streisingeri clone ZF10 18S small subunit ribosomal RNA gene, partial sequence blastn 41667 2056 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
15931128 15931128 PRJNA662254_P_NODE_3153_length_994_cov_14.989142_g2697_i0 PRJNA662254 3153 994 14.989142 148.99207148 Hydra vulgaris 6087 Cnidaria other_Eukaryota 54.7 0.028   NTclustered gi|2744889029|ref|XM_065810454.1| 6087 g2697 i0 100 0.0583501006036217 29 0 3 0 218 246 2248 2276 PREDICTED: Hydra vulgaris kinesin-like protein KIF28P (LOC100208423), transcript variant X3, mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
21563878 21563878 PRJNA662254_P_NODE_17657_length_390_cov_0.968454_g17006_i0 PRJNA662254 17657 390 0.968454 3.7769706 Metazoa 33208 Cnidaria other_Eukaryota 52.8 0.037   NTclustered gi|2114213470|ref|XM_044322636.1| 45264 g17006 i0 100 0.78974358974359 28 0 7 0 363 390 319 292 PREDICTED: Acropora millepora clumping factor A-like (LOC114976410), mRNA blastn 308 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;