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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA662254" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA662254 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5731660 5731660 PRJNA662254_P_NODE_12365_length_468_cov_1.237975_g11714_i0 PRJNA662254 12365 468 1.237975 5.793723 Planilamina ovata 2684848 SAR_Eukaryotes SAR_Eukaryotes 420 1.0799999999999998e-112   NTclustered gi|1784308423|gb|MN830171.1| 2684848 g11714 i0 85.859 71.0299145299145 396 54 84 2 40 434 414 20 Planilamina ovata isolate LJ-II-20170502 large subunit ribosomal RNA gene, partial sequence blastn 33242 420 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Kyaroikeidae Planilamina Planilamina ovata
6265706 6265706 PRJNA662254_P_NODE_12325_length_469_cov_1.166667_g11674_i0 PRJNA662254 12325 469 1.166667 5.47166823 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 320 1.1299999999999999e-82   NTclustered gi|2386259474|ref|XM_001456095.2| 5888 g11674 i0 79.515 31.138592750533 454 89 96 4 1 452 820 1271 Paramecium tetraurelia uncharacterized protein (GSPATT00021903001), partial mRNA blastn 14604 320 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
12107744 12107744 PRJNA662254_P_NODE_5970_length_704_cov_5.768621_g5366_i0 PRJNA662254 5970 704 5.7686210000000004 40.61109184 Paramecium polycaryum 109354 SAR_Eukaryotes SAR_Eukaryotes 1116 0   NTclustered gi|1409630801|gb|MG953263.1| 109354 g5366 i0 100 89.9928977272727 604 0 86 0 1 604 468 1071 Paramecium polycaryum isolate CHH7-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 63355 1116 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium polycaryum
12641130 12641130 PRJNA662254_P_NODE_28050_length_313_cov_0.962500_g27399_i0 PRJNA662254 28050 313 0.9625 3.012625 Anteglaucoma 1926396 SAR_Eukaryotes SAR_Eukaryotes 579 1.0899999999999999e-160   NTclustered gi|406609784|dbj|AB749059.1| 187299 g27399 i0 100 99.888178913738 313 0 100 0 1 313 1285 1597 Uncultured ciliate gene for 18S ribosomal RNA, partial sequence, clone: Cn-St.8-10 blastn 31265 579 1 Eukaryota Sar   Ciliophora         uncultured ciliate
13382274 13382274 PRJNA662254_P_NODE_11551_length_485_cov_4.118932_g10900_i0 PRJNA662254 11551 485 4.118932 19.9768202 Acineta flava 1003325 SAR_Eukaryotes SAR_Eukaryotes 117 1.65e-21   NTclustered gi|328684895|gb|HM122011.1| 1003325 g10900 i0 86.792 21.8865979381443 106 13 22 1 115 220 347 243 Acineta flava isolate SNK10010701 macronuclear blastn 10615 117 1 Eukaryota Sar   Ciliophora Phyllopharyngea Endogenida Acinetidae Acineta Acineta flava
18480614 18480614 PRJNA662254_P_NODE_26215_length_323_cov_1.228000_g25564_i0 PRJNA662254 26215 323 1.228 3.96644 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 545 1.14e-150   NTclustered gi|512134943|gb|JX178902.1| 1295638 g25564 i0 97.205 95.0959752321981 322 9 99 0 2 323 1460 1139 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30716 545 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
19013480 19013480 PRJNA662254_P_NODE_23255_length_342_cov_0.858736_g22604_i0 PRJNA662254 23255 342 0.858736 2.93687712 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 394 4.66e-105   NTclustered gi|21215210|gb|AF510207.1| 94289 g22604 i0 87.427 99.9444444444444 342 43 100 0 1 342 1427 1086 Sterkiella histriomuscorum beta-tubulin gene, complete cds blastn 34181 394 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
20288299 20288299 PRJNA662254_P_NODE_51796_length_248_cov_0.880000_g51145_i0 PRJNA662254 51796 248 0.88 2.1824 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 459 1.13e-124   NTclustered gi|2624665746|gb|OR878271.1| 210825 g51145 i0 100 98.9112903225806 248 0 100 0 1 248 927 680 Glaucoma scintillans isolate LLH20220320 large subunit ribosomal RNA gene, partial sequence blastn 24530 459 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Glaucomidae Glaucoma Glaucoma scintillans
22305482 22305482 PRJNA662254_P_NODE_13978_length_439_cov_4.718579_g13327_i0 PRJNA662254 13978 439 4.718579 20.71456181 Caryotricha minuta 1004043 SAR_Eukaryotes SAR_Eukaryotes 204 1.1099999999999998e-47   NTclustered gi|759083508|gb|KM222125.1| 1004043 g13327 i0 93.431 31.4464692482916 137 9 31 0 229 365 1148 1284 Caryotricha minuta voucher LWW07112802 large subunit ribosomal RNA gene, partial sequence blastn 13805 204 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha minuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;