RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA662254" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA662254 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1904518 1904518 PRJNA662254_P_NODE_60962_length_243_cov_0.905882_g60311_i0 PRJNA662254 60962 243 0.905882 2.20129326 Malassezia restricta 76775 Fungi Fungi 383 6.84e-102   NTclustered gi|1546635192|ref|XM_027629255.1| 76775 g60311 i0 95.062 1.16872427983539 243 12 100 0 1 243 3023 2781 Malassezia restricta ATP-dependent RNA helicase DHX29 (MRET_2628), partial mRNA blastn 284 383 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
4456173 4456173 PRJNA662254_P_NODE_31284_length_297_cov_1.250000_g30633_i0 PRJNA662254 31284 297 1.25 3.7125 Suillus clintonianus 1904413 Fungi Fungi 56.5 0.002   NTclustered gi|2033558000|ref|XM_041358223.1| 1904413 g30633 i0 100 0.101010101010101 30 0 10 0 255 284 195 166 Suillus clintonianus uncharacterized protein (DEU56DRAFT_919096), partial mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Suillaceae Suillus Suillus clintonianus
4456348 4456348 PRJNA662254_P_NODE_65544_length_241_cov_0.916667_g64893_i0 PRJNA662254 65544 241 0.916667 2.20916747 Malassezia restricta 76775 Fungi Fungi 435 1.84e-117   NTclustered gi|1546631802|ref|XM_027627561.1| 76775 g64893 i0 99.17 1 241 2 100 0 1 241 803 1043 Malassezia restricta solute carrier family 39 (zinc transporter), member 1/2/3 (MRET_0934), partial mRNA blastn 241 435 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
4990239 4990239 PRJNA662254_P_NODE_5244_length_758_cov_1.788321_g4665_i0 PRJNA662254 5244 758 1.788321 13.55547318 Cryptococcus 5206 Fungi Fungi 62.1 1.26e-4   NTclustered gi|1376259644|ref|XM_024656270.1| 214684 g4665 i0 97.222 1.84564643799472 36 1 5 0 378 413 1853 1818 Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA04360), mRNA blastn 1399 62.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus deneoformans
14657189 14657189 PRJNA662254_P_NODE_23812_length_338_cov_1.147170_g23161_i0 PRJNA662254 23812 338 1.14717 3.8774346 Malassezia restricta 76775 Fungi Fungi 614 3.2499999999999993e-171   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g23161 i0 99.408 97.3550295857988 338 2 100 0 1 338 1865 1528 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 32906 614 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
14657307 14657307 PRJNA662254_P_NODE_55772_length_246_cov_0.890173_g55121_i0 PRJNA662254 55772 246 0.890173 2.18982558 Trametes versicolor 5325 Fungi Fungi 52.8 0.022   NTclustered gi|636618714|ref|XM_008042301.1| 717944 g55121 i0 100 0.113821138211382 28 0 11 0 57 84 1968 1941 Trametes versicolor FP-101664 SS1 actin-like ATPase domain-containing protein (TRAVEDRAFT_128065), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes versicolor
15931082 15931082 PRJNA662254_P_NODE_18653_length_379_cov_1.643791_g18002_i0 PRJNA662254 18653 379 1.643791 6.22996789 Pseudozyma flocculosa 84751 Fungi Fungi 231 4.3199999999999985e-56   NTclustered gi|630959971|ref|XM_007878203.1| 1277687 g18002 i0 80.519 16.4775725593668 308 55 81 5 64 369 10 314 Pseudozyma flocculosa PF-1 calmodulin (PFL1_00701), partial mRNA blastn 6245 231 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa
19013490 19013490 PRJNA662254_P_NODE_32855_length_290_cov_1.345622_g32204_i0 PRJNA662254 32855 290 1.345622 3.9023038 Basidiomycota 5204 Fungi Fungi 315 3.1e-81   NTclustered gi|2594587104|ref|XM_060264525.1| 223818 g32204 i0 86.207 8.58965517241379 290 40 100 0 1 290 717 428 Malassezia japonica cross-pathway control WD-repeat protein cpc2 (cpc2), partial mRNA blastn 2491 315 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia japonica
20288322 20288322 PRJNA662254_P_NODE_66276_length_235_cov_2.376543_g65625_i0 PRJNA662254 66276 235 2.376543 5.58487605 Opisthokonta 33154 Fungi Fungi 93.5 1.24e-14   NTclustered gi|1557918162|ref|XM_027763834.1| 139825 g65625 i0 88.312 1.58723404255319 77 9 33 0 120 196 181 257 Sparassis crispa Histone H2B (SCP_1401270), partial mRNA blastn 373 93.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Sparassidaceae Sparassis Sparassis crispa
21030831 21030831 PRJNA662254_P_NODE_41437_length_261_cov_1.228723_g40786_i0 PRJNA662254 41437 261 1.228723 3.20696703 Kockovaella imperatae 4999 Fungi Fungi 178 3.759999999999999e-40   NTclustered gi|1227123063|ref|XM_022013500.1| 4999 g40786 i0 79.528 80.3563218390805 254 48 97 4 7 258 477 226 Kockovaella imperatae putative cytoplasmic chaperone (BD324DRAFT_581403), partial mRNA blastn 20973 178 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cuniculitremaceae Kockovaella Kockovaella imperatae
22305526 22305526 PRJNA662254_P_NODE_27378_length_316_cov_2.185185_g26727_i0 PRJNA662254 27378 316 2.185185 6.9051846 Kwoniella europaea 1247712 Fungi Fungi 239 2.12e-58   NTclustered gi|2752984423|ref|XM_066225644.1| 1423913 g26727 i0 81.188 76.1487341772152 303 52 95 5 2 301 91 391 Kwoniella europaea PYCC6329 GTP-binding protein ypt1 (V865_001830), partial mRNA blastn 24063 239 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella europaea
25388416 25388416 PRJNA662254_P_NODE_61420_length_243_cov_0.905882_g60769_i0 PRJNA662254 61420 243 0.905882 2.20129326 Agaricales 5338 Fungi Fungi 113 9.91e-21   NTclustered gi|1139717310|gb|KY432826.1| 67700 g60769 i0 98.438 26.3374485596708 64 1 26 0 180 243 88 25 Amanita citrina voucher NYBG:0007 28S ribosomal RNA gene, partial sequence blastn 6400 113 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Amanitaceae Amanita Amanita citrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;