RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA661142" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA661142 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22839195 22839195 PRJNA661142_P_NODE_4818_length_354_cov_5.783607_g4753_i0 PRJNA661142 4818 354 5.783607 20.47396878 Viruses 10239 Viruses Viruses 592 1.5999999999999996e-164   NTclustered gi|2177952863|gb|OL452263.1| 2900479 g4753 i0 99.387 10.3559322033898 326 2 92 0 1 326 5951 6276 MAG: Brine shrimp chuvirus 1 isolate CHN/15, complete genome blastn 3666 592 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   brine shrimp chuvirus 1
23580846 23580846 PRJNA661142_P_NODE_8919_length_244_cov_0.994872_g8854_i0 PRJNA661142 8919 244 0.994872 2.42748768 Mitoviridae sp. 2809572 Viruses Viruses 300 7.12e-77   NTclustered gi|2245489534|gb|ON163861.1| 2809572 g8854 i0 88.889 0.995901639344262 243 27 99 0 2 244 650 892 MAG: Mitoviridae sp. isolate 25-k141_218903 RNA dependent RNA polymerase gene, partial cds blastn 243 300 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;