RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA661142" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA661142 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1904237 1904237 PRJNA661142_P_NODE_12682_length_161_cov_0.910714_g12617_i0 PRJNA661142 12682 161 0.910714 1.46624954 Methanocella paludicola 570267 Archaea Archaea 281 1.57e-71   NTclustered gi|282154984|dbj|AP011532.1| 304371 g12617 i0 98.137 1 161 3 100 0 1 161 149243 149083 Methanocella paludicola SANAE DNA, complete genome blastn 161 281 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
13382175 13382175 PRJNA661142_P_NODE_12771_length_161_cov_0.910714_g12706_i0 PRJNA661142 12771 161 0.910714 1.46624954 Halalkalicoccus salilacus 3117459 Archaea Archaea 204 3.49e-48   NTclustered gi|2674869203|gb|CP144461.1| 3117459 g12706 i0 89.441 2.63354037267081 161 17 100 0 1 161 3399749 3399589 Halalkalicoccus salilacus strain FCH27 chromosome, complete genome blastn 424 204 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus salilacus
21030642 21030642 PRJNA661142_P_NODE_12497_length_162_cov_0.902655_g12432_i0 PRJNA661142 12497 162 0.902655 1.4623011 Methanothrix soehngenii 2223 Archaea Archaea 86.1 1.33e-12   NTclustered gi|328927127|gb|CP002565.1| 990316 g12432 i0 85.714 0.518518518518518 84 8 51 4 81 162 1430145 1430226 Methanosaeta concilii GP-6, complete genome blastn 84 86.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;