contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA658591" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1901658 | 1901658 | PRJNA658591_S_NODE_4362_length_218_cov_3.822485_g4299_i0 | PRJNA658591 | 4362 | 218 | 3.822485 | 8.3330173 | Alloscardovia omnicolens | 419015 | Bacteria | Bacteria | 69.4 | 1.91e-7 | NTclustered | gi|2766231342|gb|CP159991.1| | 419015 | g4299 | i0 | 100 | 0.169724770642202 | 37 | 0 | 17 | 0 | 182 | 218 | 623100 | 623064 | Alloscardovia omnicolens strain AN1009 chromosome | blastn | 37 | 69.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Alloscardovia | Alloscardovia omnicolens | ||
| 2436601 | 2436601 | PRJNA658591_S_NODE_9642_length_165_cov_1.025862_g9579_i0 | PRJNA658591 | 9642 | 165 | 1.025862 | 1.6926723 | Rothia | 32207 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g9579 | i0 | 100 | 411.806060606061 | 165 | 0 | 100 | 0 | 1 | 165 | 652992 | 653156 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 67948 | 305 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 6265222 | 6265222 | PRJNA658591_S_NODE_1085_length_388_cov_1.616519_g1022_i0 | PRJNA658591 | 1085 | 388 | 1.616519 | 6.27209372 | Kytococcus | 57499 | Bacteria | Bacteria | 571 | 2.3e-158 | NTclustered | gi|1948607475|gb|CP066015.1| | 1276 | g1022 | i0 | 93.931 | 258.30412371134 | 379 | 21 | 97 | 2 | 12 | 388 | 310159 | 310537 | Kytococcus sedentarius strain FDAARGOS_1061 chromosome, complete genome | blastn | 100222 | 571 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Kytococcaceae | Kytococcus | Kytococcus sedentarius | ||
| 8278715 | 8278715 | PRJNA658591_S_NODE_11547_length_152_cov_2.106796_g11484_i0 | PRJNA658591 | 11547 | 152 | 2.106796 | 3.20232992 | Rothia amarae | 169480 | Bacteria | Bacteria | 281 | 1.46e-71 | NTclustered | gi|1907852315|gb|CP061538.1| | 169480 | g11484 | i0 | 100 | 276.065789473684 | 152 | 0 | 100 | 0 | 1 | 152 | 1622536 | 1622385 | Rothia amarae strain KJZ-9 chromosome, complete genome | blastn | 41962 | 281 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia amarae | ||
| 10090027 | 10090027 | PRJNA658591_S_NODE_8348_length_172_cov_1.756098_g8285_i0 | PRJNA658591 | 8348 | 172 | 1.756098 | 3.02048856 | Rothia | 32207 | Bacteria | Bacteria | 311 | 2.16e-80 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g8285 | i0 | 100 | 272.03488372093 | 168 | 0 | 98 | 0 | 1 | 168 | 1003110 | 1002943 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 46790 | 311 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 11364850 | 11364850 | PRJNA658591_S_NODE_8649_length_170_cov_1.173554_g8586_i0 | PRJNA658591 | 8649 | 170 | 1.173554 | 1.9950418 | Brevibacteriaceae | 85019 | Bacteria | Bacteria | 309 | 7.64e-80 | NTclustered | gi|2667027041|dbj|AP029208.1| | 53364 | g8586 | i0 | 99.412 | 274.376470588235 | 170 | 1 | 100 | 0 | 1 | 170 | 926569 | 926400 | Brevibacterium otitidis JCM 11683 DNA, complete genome | blastn | 46644 | 309 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium otitidis | ||
| 12640593 | 12640593 | PRJNA658591_S_NODE_10990_length_156_cov_3.710280_g10927_i0 | PRJNA658591 | 10990 | 156 | 3.71028 | 5.7880368 | Micrococcus | 1269 | Bacteria | Bacteria | 289 | 9e-74 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g10927 | i0 | 100 | 292.820512820513 | 156 | 0 | 100 | 0 | 1 | 156 | 346768 | 346923 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 45680 | 289 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 12640596 | 12640596 | PRJNA658591_S_NODE_2950_length_253_cov_2.475490_g2887_i0 | PRJNA658591 | 2950 | 253 | 2.47549 | 6.2629897 | Micrococcus | 1269 | Bacteria | Bacteria | 457 | 4.16e-124 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g2887 | i0 | 99.209 | 306.715415019763 | 253 | 2 | 100 | 0 | 1 | 253 | 345709 | 345457 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 77599 | 457 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 19752488 | 19752488 | PRJNA658591_S_NODE_3676_length_233_cov_2.201087_g3613_i0 | PRJNA658591 | 3676 | 233 | 2.201087 | 5.12853271 | uncultured Actinomycetes bacterium | 152507 | Bacteria | Bacteria | 91.6 | 4.42e-14 | NTclustered | gi|2874254039|emb|OY970363.1| | 152507 | g3613 | i0 | 78.832 | 0.587982832618026 | 137 | 27 | 58 | 2 | 97 | 232 | 1902248 | 1902113 | MAG: uncultured Actinomycetes bacterium isolate MFD04212.bin.c.7 genome assembly, chromosome: 1 | blastn | 137 | 91.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | uncultured Actinomycetes bacterium | |||||
| 20287739 | 20287739 | PRJNA658591_S_NODE_10476_length_161_cov_2.250000_g10413_i0 | PRJNA658591 | 10476 | 161 | 2.25 | 3.6225 | Micrococcus | 1269 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|1949953231|gb|CP066288.1| | 1270 | g10413 | i0 | 100 | 86.0621118012422 | 161 | 0 | 100 | 0 | 1 | 161 | 2260581 | 2260741 | Micrococcus luteus strain FDAARGOS_1034 chromosome | blastn | 13856 | 298 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 20287740 | 20287740 | PRJNA658591_S_NODE_2596_length_266_cov_33.691244_g2533_i0 | PRJNA658591 | 2596 | 266 | 33.691244 | 89.61870904 | Micrococcus | 1269 | Bacteria | Bacteria | 259 | 1.34e-64 | NTclustered | gi|2274423316|gb|CP101465.1| | 1270 | g2533 | i0 | 99.301 | 145.026315789474 | 143 | 1 | 54 | 0 | 2 | 144 | 364317 | 364459 | Micrococcus luteus strain DNA1 chromosome, complete genome | blastn | 38577 | 259 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 24113354 | 24113354 | PRJNA658591_S_NODE_8539_length_170_cov_7.305785_g8476_i0 | PRJNA658591 | 8539 | 170 | 7.305785 | 12.4198345 | Aeromicrobium | 2040 | Bacteria | Bacteria | 302 | 1.28e-77 | NTclustered | gi|973193275|gb|CP011502.1| | 2041 | g8476 | i0 | 99.398 | 228.929411764706 | 166 | 1 | 98 | 0 | 1 | 166 | 957312 | 957477 | Aeromicrobium erythreum strain AR18 chromosome, complete genome | blastn | 38918 | 302 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Aeromicrobium | Aeromicrobium erythreum | ||
| 25387855 | 25387855 | PRJNA658591_S_NODE_11160_length_155_cov_2.292453_g11097_i0 | PRJNA658591 | 11160 | 155 | 2.292453 | 3.55330215 | Corynebacterium | 1716 | Bacteria | Bacteria | 265 | 1.5e-66 | NTclustered | gi|2550436109|gb|CP100368.1| | 43769 | g11097 | i0 | 97.419 | 371 | 155 | 4 | 100 | 0 | 1 | 155 | 2509744 | 2509590 | Corynebacterium propinquum strain CP4 chromosome | blastn | 57505 | 265 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium propinquum | ||
| 25387857 | 25387857 | PRJNA658591_S_NODE_2620_length_266_cov_2.262673_g2557_i0 | PRJNA658591 | 2620 | 266 | 2.262673 | 6.01871018 | Aeromicrobium | 2040 | Bacteria | Bacteria | 492 | 1.2099999999999999e-134 | NTclustered | gi|973193275|gb|CP011502.1| | 2041 | g2557 | i0 | 100 | 206.612781954887 | 266 | 0 | 100 | 0 | 1 | 266 | 958718 | 958983 | Aeromicrobium erythreum strain AR18 chromosome, complete genome | blastn | 54959 | 492 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Aeromicrobium | Aeromicrobium erythreum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;