RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA658591" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA658591 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7004076 7004076 PRJNA658591_S_NODE_1646_length_323_cov_5.419708_g1583_i0 PRJNA658591 1646 323 5.419708 17.50565684 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.008   NTclustered gi|2309594316|gb|OP536747.1| 10244 g1583 i0 100 8.97832817337461 29 0 9 0 71 99 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
21028015 21028015 PRJNA658591_S_NODE_2457_length_272_cov_326.735426_g2394_i0 PRJNA658591 2457 272 326.735426 888.72035872 Parapoxvirus orf 3431389 Viruses Viruses 110 1.46e-19   NTclustered gi|2755084441|gb|PP943425.1| 10258 g2394 i0 95.714 5.49632352941176 70 0 25 3 185 251 67825 67756 Orf virus isolate FX10, partial genome blastn 1495 110 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;