RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA658591" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 2 ✖

bioproject 1

  • PRJNA658591 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12640597 12640597 PRJNA658591_S_NODE_5630_length_198_cov_6.147651_g5567_i0 PRJNA658591 5630 198 6.147651 12.17234898 Eukaryota 2759 Plants Plants 366 5.4e-97   NTclustered gi|1714003650|gb|MN243923.1| 3079 g5567 i0 100 99.7878787878788 198 0 100 0 1 198 506 703 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 19758 366 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
22838815 22838815 PRJNA658591_S_NODE_2218_length_284_cov_541.787234_g2155_i0 PRJNA658591 2218 284 541.787234 1538.67574456 root 1 Root_unresolved Root_unresolved 363 1.07e-95   NTclustered gi|1714003650|gb|MN243923.1| 3079 g2155 i0 100 69.0739436619718 196 0 69 0 1 196 674 869 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 19617 363 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;