RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA657343" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA657343 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5726485 5726485 PRJNA657343_P_NODE_32665_length_173_cov_2.008065_g32641_i0 PRJNA657343 32665 173 2.008065 3.47395245 Basidiobolus ranarum 34480 Fungi Fungi 122 1.0899999999999999e-23   NTclustered gi|6492315|gb|AF162060.1|AF162060 34480 g32641 i0 80.368 7.6242774566474 163 30 94 2 1 162 430 591 Basidiobolus ranarum beta-tubulin 1 (btub) gene, partial cds blastn 1319 122 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
19750152 19750152 PRJNA657343_P_NODE_6636_length_311_cov_15.965649_g6612_i0 PRJNA657343 6636 311 15.965649 49.65316839 Kickxella alabastrina 61397 Fungi Fungi 165 3.58e-36   NTclustered gi|2324012667|ref|XM_051535724.1| 61397 g6612 i0 83.616 2.03215434083601 177 27 57 2 130 305 268 443 Kickxella alabastrina putative 40S ribosomal protein S15-like protein (BX661DRAFT_181480), mRNA blastn 632 165 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
21025636 21025636 PRJNA657343_P_NODE_3837_length_383_cov_1.760479_g3814_i0 PRJNA657343 3837 383 1.760479 6.74263457 Kickxella alabastrina 61397 Fungi Fungi 255 2.59e-63   NTclustered gi|2324018834|ref|XM_051536871.1| 61397 g3814 i0 82.119 78.6057441253264 302 51 79 3 52 352 467 168 Kickxella alabastrina 40S ribosomal protein S23 (BX661DRAFT_185785), mRNA blastn 30106 255 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;