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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA657343" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA657343 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
623531 623531 PRJNA657343_S_NODE_15961_length_226_cov_9.898305_g15936_i0 PRJNA657343 15961 226 9.898305 22.3701693 Neobodo designis 312471 Euglenozoa other_Eukaryota 368 1.76e-97   NTclustered gi|225216795|gb|FJ176710.1| 312471 g15936 i0 96.413 154.628318584071 223 8 99 0 4 226 905 1127 Neobodo designis HFCC95 28S ribosomal RNA gene, partial sequence blastn 34946 368 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
3173855 3173855 PRJNA657343_P_NODE_28243_length_183_cov_1.500000_g28219_i0 PRJNA657343 28243 183 1.5 2.745 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 124 3.26e-24   NTclustered gi|686637812|ref|XM_009313077.1| 71804 g28219 i0 79.661 0.967213114754098 177 32 96 3 9 183 395 221 Trypanosoma grayi putative 60S ribosomal protein L13 partial mRNA blastn 177 124 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
4451341 4451341 PRJNA657343_S_NODE_14084_length_241_cov_32.796875_g14059_i0 PRJNA657343 14084 241 32.796875 79.04046875 uncultured bodonid 212100 Euglenozoa other_Eukaryota 351 1.91e-92   NTclustered gi|28076818|gb|AF530517.1| 212100 g14059 i0 93.333 99.3153526970954 240 13 98 3 5 241 873 1112 Uncultured bodonid clone AT5-48 18S ribosomal RNA gene, partial sequence blastn 23935 351 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   uncultured bodonid
4451825 4451825 PRJNA657343_S_NODE_2544_length_443_cov_43.416244_g2520_i0 PRJNA657343 2544 443 43.416244 192.33396092 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 569 9.569999999999997e-158   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g2520 i0 90.93 134.379232505643 430 30 95 7 1 422 4363 4791 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 59530 569 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
7002136 7002136 PRJNA657343_S_NODE_15326_length_231_cov_18.648352_g15301_i0 PRJNA657343 15326 231 18.648352 43.07769312 Neobodo designis 312471 Euglenozoa other_Eukaryota 359 1.09e-94   NTclustered gi|59891951|gb|AY753611.1| 312471 g15301 i0 94.783 91.3160173160173 230 12 99 0 1 230 1226 1455 Neobodo designis isolate Dev2 18S ribosomal RNA gene, partial sequence blastn 21094 359 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
10089004 10089004 PRJNA657343_P_NODE_23968_length_194_cov_0.937931_g23944_i0 PRJNA657343 23968 194 0.937931 1.81958614 Leishmania 5658 Euglenozoa other_Eukaryota 137 4.49e-28   NTclustered gi|398015364|ref|XM_003860824.1| 5661 g23944 i0 88.496 6.10824742268041 113 13 58 0 10 122 326 438 Leishmania donovani centrin, putative (LDBPK_221260), partial mRNA blastn 1185 137 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
10089010 10089010 PRJNA657343_P_NODE_33528_length_171_cov_3.508197_g33504_i0 PRJNA657343 33528 171 3.508197 5.99901687 Trypanosoma 5690 Euglenozoa other_Eukaryota 246 6.1199999999999987e-61   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g33504 i0 93.373 152.444444444444 166 11 97 0 3 168 4632 4467 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 26068 246 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
11363858 11363858 PRJNA657343_S_NODE_15349_length_231_cov_9.082418_g15324_i0 PRJNA657343 15349 231 9.082418 20.98038558 Trypanosoma 5690 Euglenozoa other_Eukaryota 337 5.09e-88   NTclustered gi|62175522|gb|AC159414.1| 5691 g15324 i0 97 130.060606060606 200 6 87 0 23 222 65203 65004 Trypanosoma brucei chromosome 3 clone RPCI93-25B21, complete sequence blastn 30044 337 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
14651965 14651965 PRJNA657343_P_NODE_28552_length_182_cov_2.165414_g28528_i0 PRJNA657343 28552 182 2.165414 3.94105348 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 137 4.15e-28   NTclustered gi|1002444669|ref|XM_015804407.1| 157538 g28528 i0 81.111 37.7252747252747 180 26 97 7 4 179 305 480 Leptomonas pyrrhocoris 60S ribosomal protein L10a putative (RPL10a) mRNA blastn 6866 137 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
17201119 17201119 PRJNA657343_P_NODE_3834_length_383_cov_2.197605_g3811_i0 PRJNA657343 3834 383 2.197605 8.41682715 Neobodo designis 312471 Euglenozoa other_Eukaryota 551 2.949999999999999e-152   NTclustered gi|225216795|gb|FJ176710.1| 312471 g3811 i0 93.85 144.289817232376 374 10 98 1 3 376 707 1067 Neobodo designis HFCC95 28S ribosomal RNA gene, partial sequence blastn 55263 551 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
18475055 18475055 PRJNA657343_P_NODE_10815_length_260_cov_3.199052_g10791_i0 PRJNA657343 10815 260 3.199052 8.3175352 Bodo saltans 75058 Euglenozoa other_Eukaryota 333 7.559999999999999e-87   NTclustered gi|206598103|gb|FJ168548.1| 75058 g10791 i0 90.514 127.230769230769 253 22 97 2 6 257 19573 19322 Bodo saltans clone fosmid 14L17, complete sequence blastn 33080 333 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
22300125 22300125 PRJNA657343_P_NODE_17578_length_218_cov_1.118343_g17554_i0 PRJNA657343 17578 218 1.118343 2.43798774 Leishmania major 5664 Euglenozoa other_Eukaryota 54.7 0.005   NTclustered gi|157874872|ref|XM_001685796.1| 347515 g17554 i0 100 0.26605504587156 29 0 13 0 37 65 541 569 Leishmania major strain Friedlin putative 40S ribosomal protein S3 partial mRNA blastn 58 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
23576161 23576161 PRJNA657343_S_NODE_14519_length_238_cov_5.582011_g14494_i0 PRJNA657343 14519 238 5.582011 13.28518618 Neobodo designis 312471 Euglenozoa other_Eukaryota 379 8.629999999999999e-101   NTclustered gi|59891960|gb|AY753620.1| 312471 g14494 i0 96.137 93.6848739495798 233 8 98 1 1 233 1835 1604 Neobodo designis isolate TeToto3 18S ribosomal RNA gene, partial sequence blastn 22297 379 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;