contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA657343" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1899892 | 1899892 | PRJNA657343_S_NODE_20122_length_201_cov_3.368421_g20097_i0 | PRJNA657343 | 20122 | 201 | 3.368421 | 6.77052621 | Phycisphaera sp. | 2030824 | Bacteria | Bacteria | 237 | 4.4999999999999996e-58 | NTclustered | gi|2323351239|gb|CP098402.1| | 2030824 | g20097 | i0 | 88.06 | 8.48258706467662 | 201 | 23 | 100 | 1 | 1 | 201 | 3047330 | 3047131 | MAG: Phycisphaera sp. isolate MAG12 chromosome | blastn | 1705 | 237 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Phycisphaera sp. | |
| 1900206 | 1900206 | PRJNA657343_S_NODE_27662_length_169_cov_5.383333_g27637_i0 | PRJNA657343 | 27662 | 169 | 5.383333 | 9.09783277 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 235 | 1.31e-57 | NTclustered | gi|1938775668|gb|CP054178.1| | 2026777 | g27637 | i0 | 92.169 | 204.668639053254 | 166 | 13 | 98 | 0 | 1 | 166 | 192629 | 192464 | MAG: Phycisphaeraceae bacterium isolate H1_PLA4 chromosome, complete genome | blastn | 34589 | 235 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 4452108 | 4452108 | PRJNA657343_S_NODE_32884_length_151_cov_5.607843_g32859_i0 | PRJNA657343 | 32884 | 151 | 5.607843 | 8.46784293 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 244 | 1.89e-60 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g32859 | i0 | 98.561 | 33.4437086092715 | 139 | 1 | 92 | 1 | 1 | 139 | 540019 | 540156 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 5050 | 244 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 9552485 | 9552485 | PRJNA657343_S_NODE_25028_length_179_cov_1.823077_g25003_i0 | PRJNA657343 | 25028 | 179 | 1.823077 | 3.26330783 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 211 | 2.36e-50 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g25003 | i0 | 88.268 | 120.441340782123 | 179 | 17 | 99 | 4 | 2 | 178 | 655212 | 655388 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 21559 | 211 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 14652424 | 14652424 | PRJNA657343_S_NODE_13792_length_244_cov_5.692308_g13767_i0 | PRJNA657343 | 13792 | 244 | 5.692308 | 13.88923152 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 219 | 2.05e-52 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g13767 | i0 | 84.052 | 14.827868852459 | 232 | 32 | 94 | 5 | 1 | 230 | 2190373 | 2190145 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 3618 | 219 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 14653141 | 14653141 | PRJNA657343_S_NODE_31612_length_156_cov_2.457944_g31587_i0 | PRJNA657343 | 31612 | 156 | 2.457944 | 3.83439264 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 206 | 9.32e-49 | NTclustered | gi|2916415364|gb|CP170459.1| | 2026799 | g31587 | i0 | 90.446 | 94.974358974359 | 157 | 14 | 100 | 1 | 1 | 156 | 2577657 | 2577813 | MAG: Verrucomicrobiota bacterium isolate tig00002468 chromosome, complete genome | blastn | 14816 | 206 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 15189027 | 15189027 | PRJNA657343_S_NODE_28732_length_166_cov_2.350427_g28707_i0 | PRJNA657343 | 28732 | 166 | 2.350427 | 3.90170882 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 182 | 1.7e-41 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g28707 | i0 | 89.041 | 31.7710843373494 | 146 | 16 | 88 | 0 | 1 | 146 | 5152316 | 5152461 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 5274 | 182 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18475791 | 18475791 | PRJNA657343_S_NODE_15155_length_233_cov_3.320652_g15130_i0 | PRJNA657343 | 15155 | 233 | 3.320652 | 7.73711916 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 335 | 1.8499999999999992e-87 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g15130 | i0 | 94.47 | 110.609442060086 | 217 | 12 | 93 | 0 | 2 | 218 | 2556208 | 2556424 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 25772 | 335 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 24849770 | 24849770 | PRJNA657343_S_NODE_13160_length_249_cov_30.555000_g13135_i0 | PRJNA657343 | 13160 | 249 | 30.555 | 76.08195 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 307 | 4.3600000000000006e-79 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g13135 | i0 | 89.243 | 3.78313253012048 | 251 | 20 | 100 | 6 | 1 | 249 | 2190130 | 2190375 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 942 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;