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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA656952" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 8 ✖

bioproject 1

  • PRJNA656952 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1898178 1898178 PRJNA656952_P_NODE_14842_length_340_cov_2.097378_g14655_i0 PRJNA656952 14842 340 2.097378 7.1310852 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 462 1.25e-125   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g14655 i0 91.228 19.9882352941176 342 27 100 3 1 340 2425 2085 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6796 462 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3173410 3173410 PRJNA656952_P_NODE_40103_length_244_cov_0.900585_g39916_i0 PRJNA656952 40103 244 0.900585 2.1974274 Naegleria sp. 37103 Heterolobosea other_Eukaryota 451 1.86e-122   NTclustered gi|2651357798|gb|PP174311.1| 37103 g39916 i0 100 26.7254098360656 244 0 100 0 1 244 3288 3531 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6521 451 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
13376709 13376709 PRJNA656952_P_NODE_43491_length_241_cov_0.916667_g43304_i0 PRJNA656952 43491 241 0.916667 2.20916747 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 396 8.7e-106   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g43304 i0 96.281 61.3153526970954 242 7 100 2 1 241 2809 3049 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14777 396 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
14650934 14650934 PRJNA656952_P_NODE_13732_length_350_cov_2.342960_g13545_i0 PRJNA656952 13732 350 2.34296 8.20036 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 529 1.2499999999999996e-145   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g13545 i0 94 3.00571428571429 350 19 100 2 1 350 3970 3623 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1052 529 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
15188881 15188881 PRJNA656952_P_NODE_8212_length_421_cov_1.931034_g8025_i0 PRJNA656952 8212 421 1.931034 8.12965314 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 773 0   NTclustered gi|198250379|gb|EU696948.1| 556273 g8025 i0 99.762 88.3942992874109 421 1 100 0 1 421 1018 1438 Allovahlkampfia spelaea strain SK1 18S ribosomal RNA gene, complete sequence blastn 37214 773 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia spelaea
18474222 18474222 PRJNA656952_P_NODE_13835_length_349_cov_2.231884_g13648_i0 PRJNA656952 13835 349 2.231884 7.78927516 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 597 3.38e-166   NTclustered gi|529154115|gb|EU266548.2| 500012 g13648 i0 97.708 51.0888252148997 349 4 99 4 1 348 1032 687 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 17830 597 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P
23574765 23574765 PRJNA656952_P_NODE_19779_length_305_cov_5.961207_g19592_i0 PRJNA656952 19779 305 5.961207 18.18168135 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 556 4.94e-154   NTclustered gi|529154115|gb|EU266548.2| 500012 g19592 i0 99.672 73.616393442623007 305 0 100 1 1 305 1452 1755 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 22453 556 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P
24848343 24848343 PRJNA656952_P_NODE_16000_length_331_cov_1.767442_g15813_i0 PRJNA656952 16000 331 1.767442 5.85023302 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 579 1.1599999999999996e-160   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g15813 i0 98.187 30.3051359516616 331 6 100 0 1 331 3687 3357 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10031 579 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;