contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA645397" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2434338 | 2434338 | PRJNA645397_P_NODE_7322_length_191_cov_1.084507_g7249_i0 | PRJNA645397 | 7322 | 191 | 1.084507 | 2.07140837 | Staphylococcus | 1279 | Bacteria | Bacteria | 292 | 8.89e-75 | NTclustered | gi|1835046049|gb|CP051643.1| | 29380 | g7249 | i0 | 97.661 | 513.251308900524 | 171 | 3 | 90 | 1 | 21 | 191 | 62417 | 62248 | Staphylococcus caprae strain SY333 chromosome, complete genome | blastn | 98031 | 294 | 0.993197278911565 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus caprae | ||
| 4447360 | 4447360 | PRJNA645397_P_NODE_9544_length_168_cov_0.873950_g9471_i0 | PRJNA645397 | 9544 | 168 | 0.87395 | 1.468236 | Salinicoccus halodurans | 407035 | Bacteria | Bacteria | 254 | 3.6e-63 | NTclustered | gi|820755876|gb|CP011366.1| | 407035 | g9471 | i0 | 98.601 | 1.18452380952381 | 143 | 2 | 85 | 0 | 26 | 168 | 362630 | 362772 | Salinicoccus halodurans strain H3B36, complete genome | blastn | 199 | 254 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Salinicoccus | Salinicoccus halodurans | ||
| 7537069 | 7537069 | PRJNA645397_P_NODE_9446_length_168_cov_0.873950_g9373_i0 | PRJNA645397 | 9446 | 168 | 0.87395 | 1.468236 | Bacillus | 1386 | Bacteria | Bacteria | 305 | 9.81e-79 | NTclustered | gi|2212750716|gb|CP063975.1| | 1396 | g9373 | i0 | 99.405 | 100 | 168 | 1 | 100 | 0 | 1 | 168 | 180963 | 180796 | Bacillus cereus strain N435-1 chromosome, complete genome | blastn | 16800 | 305 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 8272868 | 8272868 | PRJNA645397_S_NODE_927_length_193_cov_1.048611_g925_i0 | PRJNA645397 | 927 | 193 | 1.048611 | 2.02381923 | Ruoffia tabacinasalis | 87458 | Bacteria | Bacteria | 324 | 3.19e-84 | NTclustered | gi|2686201366|gb|CP144682.1| | 87458 | g925 | i0 | 96.891 | 5.22279792746114 | 193 | 6 | 100 | 0 | 1 | 193 | 2242587 | 2242395 | Ruoffia tabacinasalis strain jzb001 chromosome, complete genome | blastn | 1008 | 324 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Ruoffia | Ruoffia tabacinasalis | ||
| 21022025 | 21022025 | PRJNA645397_P_NODE_8277_length_179_cov_0.984615_g8204_i0 | PRJNA645397 | 8277 | 179 | 0.984615 | 1.76246085 | Salinicoccus halodurans | 407035 | Bacteria | Bacteria | 268 | 1.3799999999999999e-67 | NTclustered | gi|820755876|gb|CP011366.1| | 407035 | g8204 | i0 | 97.468 | 0.88268156424581 | 158 | 2 | 88 | 2 | 22 | 179 | 1086101 | 1086256 | Salinicoccus halodurans strain H3B36, complete genome | blastn | 158 | 268 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Salinicoccus | Salinicoccus halodurans | ||
| 21022034 | 21022034 | PRJNA645397_P_NODE_9937_length_166_cov_0.888889_g9864_i0 | PRJNA645397 | 9937 | 166 | 0.888889 | 1.47555574 | Clostridioides difficile | 1496 | Bacteria | Bacteria | 263 | 5.9e-66 | NTclustered | gi|2062474862|gb|CP072118.1| | 1496 | g9864 | i0 | 95.181 | 70.789156626506 | 166 | 8 | 100 | 0 | 1 | 166 | 4058394 | 4058229 | Clostridioides difficile isolate MAR286 chromosome, complete genome | blastn | 11751 | 263 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 24111063 | 24111063 | PRJNA645397_P_NODE_11119_length_162_cov_0.876106_g11046_i0 | PRJNA645397 | 11119 | 162 | 0.876106 | 1.41929172 | Bacillus | 1386 | Bacteria | Bacteria | 294 | 2.03e-75 | NTclustered | gi|2582827010|gb|CP135060.1| | 1396 | g11046 | i0 | 99.383 | 101 | 162 | 1 | 100 | 0 | 1 | 162 | 2094077 | 2093916 | Bacillus cereus strain B126_1 chromosome, complete genome | blastn | 16362 | 294 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;