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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA643700" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA643700 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
618225 618225 PRJNA643700_P_NODE_391601_length_168_cov_1.310924_g390045_i0 PRJNA643700 391601 168 1.310924 2.20235232 Oscarella lobularis 121494 Porifera other_Eukaryota 52.8 0.014   NTclustered gi|2746769879|ref|XM_065990288.1| 121494 g390045 i0 100 0.333333333333333 28 0 17 0 34 61 1475 1502 PREDICTED: Oscarella lobularis indoleacetamide hydrolase-like (LOC136199967), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
23570830 23570830 PRJNA643700_P_NODE_241379_length_245_cov_2.637755_g239823_i0 PRJNA643700 241379 245 2.637755 6.46249975 Amphimedon queenslandica 400682 Porifera other_Eukaryota 56.5 0.002   NTclustered gi|1133469140|ref|XM_019999151.1| 400682 g239823 i0 100 0.122448979591837 30 0 12 0 107 136 1273 1244 PREDICTED: Amphimedon queenslandica uncharacterized LOC109583713 (LOC109583713), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;