contig_metadata
6 rows where analysis = "blastn", bioproject = "PRJNA643700" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1894303 | 1894303 | PRJNA643700_P_NODE_227442_length_255_cov_4.199029_g225886_i0 | PRJNA643700 | 227442 | 255 | 4.199029 | 10.70752395 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 52.8 | 0.023 | NTclustered | gi|1376134401|ref|XM_024647160.1| | 34506 | g225886 | i0 | 100 | 0.109803921568627 | 28 | 0 | 11 | 0 | 221 | 248 | 141 | 168 | Strongyloides ratti N-alpha-acetyltransferase 35, NatC auxiliary subunit (SRAE_1000033900), partial mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 4445766 | 4445766 | PRJNA643700_P_NODE_205224_length_274_cov_1.155556_g203668_i0 | PRJNA643700 | 205224 | 274 | 1.155556 | 3.16622344 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 52.8 | 0.025 | NTclustered | gi|687865582|emb|LK927621.1| | 6239 | g203668 | i0 | 100 | 0.204379562043796 | 28 | 0 | 10 | 0 | 15 | 42 | 136086 | 136059 | Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000084 | blastn | 56 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 15920883 | 15920883 | PRJNA643700_P_NODE_111733_length_393_cov_2.485465_g110179_i0 | PRJNA643700 | 111733 | 393 | 2.485465 | 9.76787745 | Strongyloides papillosus | 174720 | Nematoda | Nematoda | 52.8 | 0.038 | NTclustered | gi|690020008|emb|LM527523.1| | 174720 | g110179 | i0 | 100 | 0.0712468193384224 | 28 | 0 | 7 | 0 | 121 | 148 | 328 | 301 | Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_scaffold0000112 | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides papillosus | |
| 15920966 | 15920966 | PRJNA643700_P_NODE_234053_length_251_cov_1.029703_g232497_i0 | PRJNA643700 | 234053 | 251 | 1.029703 | 2.58455453 | Strongyloides papillosus | 174720 | Nematoda | Nematoda | 52.8 | 0.023 | NTclustered | gi|687022698|emb|LM525612.1| | 174720 | g232497 | i0 | 92.105 | 0.151394422310757 | 38 | 2 | 15 | 1 | 37 | 74 | 40236 | 40200 | Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000022 | blastn | 38 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides papillosus | |
| 17196138 | 17196138 | PRJNA643700_P_NODE_38234_length_660_cov_2.746318_g36885_i0 | PRJNA643700 | 38234 | 660 | 2.746318 | 18.1256988 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 54.7 | 0.018 | NTclustered | gi|351061203|emb|FO081081.1| | 6239 | g36885 | i0 | 100 | 0.0878787878787879 | 29 | 0 | 4 | 0 | 203 | 231 | 36070 | 36042 | Caenorhabditis elegans Cosmid F54D7, complete sequence | blastn | 58 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 24844535 | 24844535 | PRJNA643700_P_NODE_331940_length_194_cov_1.075862_g330384_i0 | PRJNA643700 | 331940 | 194 | 1.075862 | 2.08717228 | Strongyloides papillosus | 174720 | Nematoda | Nematoda | 52.8 | 0.017 | NTclustered | gi|690018472|emb|LM525710.1| | 174720 | g330384 | i0 | 100 | 0.288659793814433 | 28 | 0 | 14 | 0 | 93 | 120 | 77094 | 77067 | Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000106 | blastn | 56 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides papillosus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;