RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA643700" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA643700 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10822553 10822553 PRJNA643700_P_NODE_427989_length_160_cov_2.045045_g426433_i0 PRJNA643700 427989 160 2.045045 3.272072 Ptychodera flava 63121 Hemichordata other_Eukaryota 60.2 7.93e-5   NTclustered gi|2875660765|ref|XM_070715258.1| 63121 g426433 i0 90.698 0.26875 43 4 27 0 58 100 303 345 PREDICTED: Ptychodera flava G protein-coupled receptor 137Ba-like (LOC139144551), mRNA blastn 43 60.2 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
12097470 12097470 PRJNA643700_P_NODE_127810_length_365_cov_1.316456_g126255_i0 PRJNA643700 127810 365 1.316456 4.8050644 Ptychodera flava 63121 Hemichordata other_Eukaryota 52.8 0.035   NTclustered gi|2875669489|ref|XM_070719422.1| 63121 g126255 i0 100 1.61095890410959 28 0 8 0 126 153 570 597 PREDICTED: Ptychodera flava reticulocyte-binding protein homolog 2a-like (LOC139148120), mRNA blastn 588 52.8 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
13372251 13372251 PRJNA643700_P_NODE_357571_length_182_cov_1.172932_g356015_i0 PRJNA643700 357571 182 1.172932 2.13473624 Ptychodera flava 63121 Hemichordata other_Eukaryota 52.8 0.015   NTclustered gi|2875660996|ref|XM_070715370.1| 63121 g356015 i0 100 0.153846153846154 28 0 15 0 132 159 2179 2152 PREDICTED: Ptychodera flava clathrin heavy chain 1-like (LOC139144654), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
14647033 14647033 PRJNA643700_P_NODE_249332_length_240_cov_1.361257_g247776_i0 PRJNA643700 249332 240 1.361257 3.2670168 Ptychodera flava 63121 Hemichordata other_Eukaryota 52.8 0.022   NTclustered gi|2875694351|ref|XM_070680470.1| 63121 g247776 i0 100 0.116666666666667 28 0 12 0 104 131 7027 7054 PREDICTED: Ptychodera flava methyl-CpG-binding domain protein 5-like (LOC139117386), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;